Gene Information

Name : cyoB (ECOK1_0411)
Accession : YP_006099652.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : cytochrome o ubiquinol oxidase subunit I
Function : -
COG functional category : -
COG ID : -
EC number : 1.10.3.-
Position : 452053 - 454044 bp
Length : 1992 bp
Strand : -
Note : identified by match to protein family HMM PF00115; match to protein family HMM TIGR02843

DNA sequence :
ATGTTCGGAAAATTATCACTTGATGCAGTCCCGTTCCATGAACCTATCGTCATGGTTACGATCGCTGGCATTATTTTGGG
AGGTCTGGCGCTCGTTGGCCTGATCACTTACTTCGGTAAGTGGACCTACCTGTGGAAAGAGTGGCTGACCTCCGTCGACC
ATAAACGCCTCGGTATCATGTATATCATCGTGGCGATTGTGATGTTGCTGCGTGGTTTTGCTGACGCCATTATGATGCGT
AGCCAGCAGGCCCTTGCCTCGGCGGGCGAAGCGGGCTTCCTGCCACCTCACCACTACGATCAGATCTTCACCGCGCACGG
CGTGATTATGATCTTCTTCGTGGCGATGCCTTTCGTTATCGGTCTGATGAACCTGGTGGTTCCGCTGCAGATCGGCGCGC
GTGACGTTGCGTTCCCGTTCCTCAACAACTTAAGCTTCTGGTTTACCGTTGTTGGTGTGATTCTGGTTAACGTTTCTCTC
GGCGTGGGCGAATTTGCGCAGACCGGCTGGCTGGCCTATCCACCGCTATCGGGAATAGAGTACAGTCCGGGAGTCGGTGT
CGATTACTGGATATGGAGTCTCCAGCTATCCGGTATAGGTACGACGCTTACCGGTATCAACTTCTTCGTTACCATTCTAA
AGATGCGCGCACCGGGCATGACCATGTTCAAGATGCCAGTATTTACCTGGGCATCACTGTGCGCGAACGTACTGATTATT
GCTTCCTTCCCAATTCTGACGGTTACCGTCGCGTTGTTGACCCTGGATCGCTATCTGGGCACCCATTTCTTTACCAACGA
TATGGGTGGCAACATGATGATGTATATCAACCTGATTTGGGCCTGGGGCCACCCGGAAGTTTACATCTTGATCCTGCCTG
TATTCGGTGTGTTCTCCGAAATTGCGGCAACCTTCTCGCGTAAACGTCTGTTTGGTTATACCTCGCTGGTATGGGCAACC
GTCTGTATCACCGTGCTGTCGTTCATCGTCTGGCTGCACCACTTCTTTACGATGGGTGCGGGCGCGAACGTAAACGCCTT
CTTTGGTATCACCACGATGATTATCGCCATCCCGACCGGGGTGAAGATCTTCAACTGGCTGTTCACCATGTATCAGGGCC
GCATCGTGTTCCATTCTGCGATGCTGTGGACCATCGGTTTTATCGTCACCTTCTCGGTGGGCGGGATGACTGGCGTGCTG
CTGGCAGTACCGGGCGCGGACTTCGTTCTGCATAACAGCCTGTTCCTGATTGCGCACTTCCATAACGTGATCATCGGCGG
CGTGGTCTTCGGCTGCTTCGCAGGGATGACCTACTGGTGGCCTAAAGCGTTCGGTTTCAAACTGAACGAAACCTGGGGTA
AACGCGCGTTCTGGTTCTGGATCATCGGCTTCTTCGTTGCCTTTATGCCACTGTATGCGCTGGGCTTCATGGGCATGACC
CGTCGTTTGAGCCAGCAGATTGACCCGCAGTTCCACACCATGCTGATGATTGCAGCCAGCGGTGCGGTACTGATTGCGCT
GGGTATTCTCTGCCTCGTTATTCAGATGTACGTTTCTATTCGTGACCGCGACCAGAACCGTGACCTGACTGGCGACCCGT
GGGGTGGCCGTACGCTGGAGTGGGCAACCTCTTCCCCGCCTCCGTTCTATAACTTTGCCGTTGTGCCGCACGTTCACGAA
CGTGATGCATTCTGGGAAATGAAAGAGAAAGGCGAAGCGTACAAAAAGCCTGACCACTATGAAGAAATTCATATGCCAAA
AAACAGCGGTGCCGGTATCGTCATTGCGGCTTTCTCCACCATCTTCGGTTTCGCCATGATCTGGCATATCTGGTGGCTGG
CGATTGTTGGCTTCGCAGGCATGATCATCACCTGGATCGTGAAAAGCTTCGACGAGGACGTGGATTACTACGTGCCGGTG
GCAGAAATCGAAAAACTGGAAAACCAGCATTTCGATGAGATTACTAAGGCAGGGCTGAAAAATGGCAACTGA

Protein sequence :
MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMR
SQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII
ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWAT
VCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVL
LAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT
RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHE
RDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPV
AEIEKLENQHFDEITKAGLKNGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 2e-83 44