Gene Information

Name : ECOK1_4030 (ECOK1_4030)
Accession : YP_006103129.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : putative hexulose-6-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4128826 - 4129686 bp
Length : 861 bp
Strand : +
Note : identified by match to protein family HMM PF01261; match to protein family HMM TIGR00542

DNA sequence :
GTGCGTAATCATCCGTTAGGCATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAA
AAGCTGTGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGTTGTCACGTCTTGACTGGAGCGCCGCAC
AACGTGCTTCGCTGGTCACTGCGATGATCGAAACGGGTGTTGCTATTCCGTCAATGTGCCTGTCCGCACATCGTCGTTTT
CCTTTTGGTAGCCGGGACGACGCCGTGCGCCAGCGGGCGCGGGAGATTATGAGTAAAGCGATTCGCCTGGCGCGCGATCT
CGGCATTCGTACTATTCAACTGGCAGGTTACGACGTCTATTACGAGGATCATGACGAAGGCACCCAGCAACGGTTTGCTG
AAGGGCTGGCGTGGGCGGTTGAACAGGCAGCGGCATCACAAGTCATGCTGGCGGTGGAGATTATGGACACCGCGTTTATG
AACTCTATCAGCAAATGGAAAAAGTGGGACGAAATGCTTGCGTCACCGTGGTTCACCGTTTACCCGGACGTAGGCAATCT
CAGCGCCTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATCGACCGTATCGCCGCCATCCACCTGAAAGACACTC
AACCCGTTACCGAACATAGCCCCGGACAGTTCCGCGATGTGCCGTTTGGCGAAGGCTGTGTCGATTTTGTTGGCATCTTC
AAAACGCTGCATGAGCTGAACTATCGCGGATCATTTCTGATTGAAATGTGGACCGAAAAAGCCAAAGAGCCGGTGCTGGA
GATTATTCAGGCGCGGCGCTGGATTGAAGCGCGTATGCAGGAGGCCGGATTTATATGTTAG

Protein sequence :
MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRASLVTAMIETGVAIPSMCLSAHRRF
PFGSRDDAVRQRAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTQQRFAEGLAWAVEQAAASQVMLAVEIMDTAFM
NSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEHSPGQFRDVPFGEGCVDFVGIF
KTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 5e-63 55