Gene Information

Name : ECOK1_3851 (ECOK1_3851)
Accession : YP_006102954.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : periplasmic pilus chaperone family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3937144 - 3937896 bp
Length : 753 bp
Strand : -
Note : identified by similarity to SP:P31697; match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence :
ATGAAATGTATTATTGGAAATAAAAAATGGGTTTGTGGATTCAGGGATGAATTAAAAGTATCACAAAATATTATACGCTC
AGGGATTCTTTTTTTACTATCGATATTATTTATTAATAATGCGTCCGCGGGCGGGTTTGGCCTTGGCGTAACGCGATTGA
TTTATCCGGCAGAAAGTAAGCAAATAACACTCAGTGTGCAAAATAGCGGTGACAACACCAGTTATTTAATTCAATCATGG
GTTGATGACAGTAAAACGGAAAAAAAGAGCCAGGATTTTGTTATCACTCCTCCCCTCTTTATGTTGCCAACGCGTAAAGA
AGCTTCATTACGTATCATGTTTCTTGGTAAGACTAATTTGCCGACCGATCGTGAAACTTTGTATTGGATGAATGTTAAAG
CAATTCCGCCAACAGATGAGAAAAATACACAGAAGAATACCTTACAGTTGGCATTACAAAACAAAATCAAGCTATTTTAT
CGCCCGGAAAATCTACCTGTGCAACCAGGAAAAGCACGAAATATGTTGCGGTTTAAGTATGAGGGAAAACAACTAAAAGT
TATCAATCCTTCGCCTTATTACCTGACACTGACAGGAATTAAAGTACAAGGGAGTAAATTGCCCAATATGTTTGTACCAC
CGAAAAGTGATATTACGGTCTCGTCGCCAGTGACGTTGGCTGGTGAAATTACTTATCAAACAATTAATGACTTTGGCGCT
ACGACGGAGCGGCAGAAAGGAATAATGCAGTAA

Protein sequence :
MKCIIGNKKWVCGFRDELKVSQNIIRSGILFLLSILFINNASAGGFGLGVTRLIYPAESKQITLSVQNSGDNTSYLIQSW
VDDSKTEKKSQDFVITPPLFMLPTRKEASLRIMFLGKTNLPTDRETLYWMNVKAIPPTDEKNTQKNTLQLALQNKIKLFY
RPENLPVQPGKARNMLRFKYEGKQLKVINPSPYYLTLTGIKVQGSKLPNMFVPPKSDITVSSPVTLAGEITYQTINDFGA
TTERQKGIMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-46 47
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_3851 YP_006102954.1 periplasmic pilus chaperone family protein VFG0911 Protein 1e-45 48
ECOK1_3851 YP_006102954.1 periplasmic pilus chaperone family protein VFG1644 Protein 2e-45 47
ECOK1_3851 YP_006102954.1 periplasmic pilus chaperone family protein VFG0875 Protein 7e-50 46
ECOK1_3851 YP_006102954.1 periplasmic pilus chaperone family protein VFG0445 Protein 4e-48 45
ECOK1_3851 YP_006102954.1 periplasmic pilus chaperone family protein VFG0455 Protein 4e-37 41