Gene Information

Name : gspG (ECOK1_3746)
Accession : YP_006102851.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3831901 - 3832338 bp
Length : 438 bp
Strand : +
Note : identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence : 
ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTAATTGTCATCATTGGCGTACTCGCCAG
CCTGGTGGTTCCCAACCTGATGGGCAATAAAGAAAAGGCGGATAAACAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAA
ACGCCCTGGATATGTACAAGCTCGACAATCATCGCTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCG
ACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATGATTA
TGTCCTCGTTAATCCTGGTGAGCATGGTGCATACGATCTGCTTTCAGCAGGACCCGATGGTGAAATGGGAACCGAGGACG
ACATCACCAACTGGGGTTTGAGCAAGAAGAAAAAGTAA

Protein sequence : 
MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHRYPTTNQGLESLVEAP
TLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-39 65
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-39 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_006102851.1 general secretion pathway protein G VFG2050 Protein 1e-39 65
gspG YP_006102851.1 general secretion pathway protein G VFG0180 Protein 1e-30 55
gspG YP_006102851.1 general secretion pathway protein G VFG1871 Protein 2e-30 52