Gene Information

Name : ECOK1_3455 (ECOK1_3455)
Accession : YP_006102570.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein FhuC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3548920 - 3549729 bp
Length : 810 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
GTGGCACATAACGCAAAAGGGCAGGGGCTGATCCTCGACAATGTTTCTGCCGGGTATCACAAGAAGATCATTGTTGATGG
TGTTTCTTTCTCCGTTCCCACAGAAAAAATGACCGTTCTGGTTGGGGCAAACGGCTGTGGAAAGTCGACGTTGCTCAGCA
CCATTGCACGTATCTTGCAACCCATGGGCGGTTCGATATTGCTTGATGGCAAAGCGATTCACGAGCAACCAACGAAAGCG
TTATCCCGTAGACTTGGGATCTTGCCGCAGTCGCCATTATTGCCGGAGGGCTTAACCGTTTATGAACTGGTATCGCGTGG
GCGTTTTCCCTGGCAAAATTTCATACGTCAATGGAGCGACGCCGATGAGCTGGCGGTGGAAGAGGCCCTGAAATTAACGG
GTACGCAGGAGTTTGCACATTTACCTGTTGAAAAACTCTCTGGTGGGCAGCGCCAGCGTTGCTGGATTGCGATGGTGTTG
GCGCAAAAGACGCCTTATATCCTGCTGGATGAACCCACAACCTGGCTTGATTTACGTTATCAGGTTGAAATTCTTGAGTT
ATTACATGATTTAACGCGTCATCACGGGCGTACAGTCGTCGTGGTGTTGCATGATCTGAATTTTGCCGTCAATTATGGTG
ATACGTTGATATTTTTACGCCAGGGGAAAGTGGTGCGTGTGTTGAATGAGGGGGAGCATTGCACGCCTGAGCTGGTAAAA
GCGGTCTTTGACGTTGATGTTCACGCATCAATAAATCCTCTGACGGGAAAGCCGTACTTCATGCCGTTTCGTGGTGTAGA
AAAAGTATGA

Protein sequence : 
MAHNAKGQGLILDNVSAGYHKKIIVDGVSFSVPTEKMTVLVGANGCGKSTLLSTIARILQPMGGSILLDGKAIHEQPTKA
LSRRLGILPQSPLLPEGLTVYELVSRGRFPWQNFIRQWSDADELAVEEALKLTGTQEFAHLPVEKLSGGQRQRCWIAMVL
AQKTPYILLDEPTTWLDLRYQVEILELLHDLTRHHGRTVVVVLHDLNFAVNYGDTLIFLRQGKVVRVLNEGEHCTPELVK
AVFDVDVHASINPLTGKPYFMPFRGVEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-49 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-49 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-44 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-51 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-51 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-51 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_3455 YP_006102570.1 ferrichrome transport ATP-binding protein FhuC BAC0164 Protein 1e-44 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_3455 YP_006102570.1 ferrichrome transport ATP-binding protein FhuC VFG1042 Protein 1e-44 45
ECOK1_3455 YP_006102570.1 ferrichrome transport ATP-binding protein FhuC VFG0925 Protein 1e-49 44