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Name : gspC (ECOK1_3382) Accession : YP_006102497.1 Strain : Escherichia coli IHE3034 Genome accession: NC_017628 Putative virulence/resistance : Virulence Product : general secretion pathway protein C Function : - COG functional category : - COG ID : - EC number : - Position : 3468808 - 3469767 bp Length : 960 bp Strand : - Note : identified by similarity to SP:P31699; match to protein family HMM TIGR01713 DNA sequence : TTGGCGCGGGTTGTTTTTCGTGACGCACGAATTTATCTCATTCAATGGCTGACTAAAATTCGTCACATTCTTAGCCAGAT ACAATCTCTTAATACAGACAAAGAGCATCTGCGAAAAATGGTGCGCGGGATGTTCTGGCTCATGCTGCTTATTATTTCTG CAAAAATGGCGTATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATATACGGCGGTTTCCTCATCGGTGAATAAACCG CTCCGTGCGGATGCAAAACCGTTCGATAAAAATGACGTGCAATTAGTCAGCCAACAAAACTGGTTTGGCAAATATCAACC CGTCGCCGCACCGGTAAAACAACCTGAATCTGCGCCTGTGGCAGAAACGCGTCTTAATGTGGTGCTGCGTGGGATCGCCT TTGGTGCCAGACCCGGCGTGGTGATTGAAGAAGGCGGCAAACAGCAGGTCTATTTGCAGGGTGAACGGCTTGGCTCTCAC AACGCAGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGCTATCAGGGGAAAATGGAACGTCTGAGTCTGGCAGA GGAGGAACGCCCCCCTGTGGCGGTGACCAGCAAAAAAGCCGCCAGCGACGAAGCAAAGCAAGCTGTTGCTGAACCTGTCG TCAGTGCGCCAGTGGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAG CTTACGCCTGTGCGTAAGGAGGGAATTGTCGGTTATGCAGTGAAGCCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGG TTTCAGGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGC AGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCTACGACATTTCCATCGCACTGCGCTAA Protein sequence : MARVVFRDARIYLIQWLTKIRHILSQIQSLNTDKEHLRKMVRGMFWLMLLIISAKMAYSLWRYFSFSAEYTAVSSSVNKP LRADAKPFDKNDVQLVSQQNWFGKYQPVAAPVKQPESAPVAETRLNVVLRGIAFGARPGVVIEEGGKQQVYLQGERLGSH NAVIEEINRDHVMLRYQGKMERLSLAEEERPPVAVTSKKAASDEAKQAVAEPVVSAPVEIPAAVRQALAKDPQKIFNYIQ LTPVRKEGIVGYAVKPGADRSLFDASGFREGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARYDISIALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-113 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspC | YP_006102497.1 | general secretion pathway protein C | VFG2046 | Protein | 4e-110 | 92 |
