Gene Information

Name : gspG (ECOK1_3378)
Accession : YP_006102493.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3463530 - 3463985 bp
Length : 456 bp
Strand : -
Note : identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence : 
ATGAATTCGTTATCCCGCACACAAAAACCACGGGCAGGTTTTACCCTGCTGGAAGTGATGGTGGTGATTGTTATTCTTGG
CGTCCTGGCAAGTCTGGTAGTGCCTAACCTGCTGGGCAACAAAGAGAAAGCCGATCGGCAAAAAGCCATCAGCGATATCG
TGGCGCTGGAAAACGCACTGGATATGTACCGACTGGATAACGGGCGTTATCCGACCACCGAACAGGGACTGGAGGCGCTG
ATCCAGCAGCCAGCCAATATGGCGGACGCCCGCAACTACCGTACCGGTGGATACATCAAACGACTGCCAAAAGATCCGTG
GGGCAATGATTATCAGTATCTCAGCCCGGGTGAAAAAGGGCTGTTTGATGTTTATACCCTGGGAGCAGATGGTCAGGAAA
ACGGGGAGGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAA

Protein sequence : 
MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPTTEQGLEAL
IQQPANMADARNYRTGGYIKRLPKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-66 100
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-66 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_006102493.1 general secretion pathway protein G VFG2050 Protein 3e-66 99
gspG YP_006102493.1 general secretion pathway protein G VFG0180 Protein 2e-37 55
gspG YP_006102493.1 general secretion pathway protein G VFG1871 Protein 1e-33 53