Gene Information

Name : rdgB (ECOK1_3342)
Accession : YP_006102458.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3427387 - 3427980 bp
Length : 594 bp
Strand : +
Note : identified by similarity to SP:Q8XCU5; match to protein family HMM PF01725; match to protein family HMM TIGR00042

DNA sequence :
ATGCAAAAAGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGA
TATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAG
CGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCG
CCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAA
AGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGC
TGGTATGCCACGGTAGCTGGCCAGGCGTGATTACTCGTGAACCAGCGGGCACTGGTGGCTTTGGTTATGATCCAATCTTC
TTCGTACCTTCCGAAGGGAAAACCGCTGCCGAACTGACCCGCGAAGAAAAGAGCGCCATTTCCCACCGTGGTCAGGCGTT
GAAACTGCTGCTGGACGCTTTACGTAATGGTTAA

Protein sequence :
MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTGLPAIADDSGLAVDALGGA
PGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 7e-27 44