|
Name : lspA (ECOK1_0023) Accession : YP_006099280.1 Strain : Escherichia coli IHE3034 Genome accession: NC_017628 Putative virulence/resistance : Unknown Product : signal peptidase II Function : - COG functional category : - COG ID : - EC number : 3.4.23.36 Position : 26734 - 27228 bp Length : 495 bp Strand : + Note : identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077 DNA sequence : ATGAGTCAATCGATCTGTTCAACAGGGCTACGCTGGCTGTGGCTGGTGGTAGTCGTGCTGATTATCGATCTGGGCAGCAA ATACCTGATCCTCCAGAACTTTGCTCTGGGGGATACGGTCCCGCTGTTCCCGTCGCTTAATCTGCATTATGCGCGTAACT ATGGCGCAGCGTTTAGTTTCCTTGCCGATAGCGGCGGCTGGCAGCGTTGGTTCTTTGCCGGTATTGCGATTGGTATTAGC GTGATCCTGGCAGTGATGATGTATCGCTCGAAGGCCACGCAGAAGCTAAACAATATCGCTTACGCGCTGATTATTGGCGG CGCACTGGGCAACCTGTTCGACCGCCTGTGGCACGGCTTCGTTGTCGATATGATCGACTTCTATGTCGGCGACTGGCACT TCGCCACCTTCAACCTTGCCGATACTGCCATTTGTGTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTACCTTCTAAA GCGAAAAAACAATAA Protein sequence : MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGIS VILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSK AKKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lspA | ADI24143.1 | lipoprotein signal peptidase | Not tested | AbaR1 | Protein | 5e-20 | 47 |
| lspA | ACS32043.1 | lipoprotein signal peptidase | Not tested | AbaR5 | Protein | 8e-20 | 47 |
| lspA | CAJ77023.1 | lipoprotein signal peptidase | Not tested | AbaR1 | Protein | 5e-20 | 47 |
| lspA | CAJ77096.1 | Lipoprotein signal poeptidase | Not tested | AbaR1 | Protein | 4e-21 | 46 |
| lspA | ADZ05771.1 | lipoprotein signal peptidase | Not tested | AbaR11 | Protein | 4e-21 | 46 |
| lspA | AGK36655.1 | lipoprotein signal peptidase | Not tested | AbaR26 | Protein | 4e-21 | 46 |
| ACICU_00236 | YP_001844895.1 | lipoprotein signal peptidase | Not tested | AbaR20 | Protein | 5e-21 | 46 |
| lspA | ACN81031.1 | lipoprotein signal peptidase | Not tested | AbaR5 | Protein | 5e-21 | 46 |
