Gene Information

Name : galF (ECOK1_2270)
Accession : YP_006101425.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : regulatory protein GalF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2328671 - 2329564 bp
Length : 894 bp
Strand : -
Note : identified by match to protein family HMM PF00483; match to protein family HMM TIGR01105

DNA sequence : 
ATGACGAATTTAAAAGCAGTTATTCCTGTAGCGGGTCTTGGGATGCATATGTTGCCTGCCACTAAGGCGATTCCCAAAGA
GATGCTACCGATCGTCGACAAGCCAATGATTCAGTACATCGTTGACGAGATTGTGGCTGCAGGGATCAAAGAAATCCTCC
TGGTAACTCACGCGTCCAAGAACGCGGTCGAAAACCACTTCGACACCTCTTATGAATTAGAATCTCTCCTTGAACAGCGC
GTGAAGCGTCAACTGCTGGCGGAAGTACAGTCCATTTGCCCGCCGGGCGTGACAATTATGAACGTGCGTCAGGGCGAACC
TTTAGGTTTGGGCCACTCCATTTTATGTGCACGACCTGCCATTGGTGACAATCCATTTGTCGTGGTGCTGCCAGACGTTG
TGATCGACGACGCCAGCGCCGACCCGCTGCGCTACAACCTTGCTGCCATGATTGCGCGCTTTAACGAAACTGGCCGCAGC
CAGGTTCTGGCAAAACGCATGCCGGGCGATCTCTCTGAATACTCCGTCATCCAGACTAAAGAACCGCTTGATCGCGAAGG
TAAAGTCAGCCGCATTGTTGAATTTATCGAAAAACCGGATCAGCCGCAGACCCTGGACTCAGACATCATGGCTGTAGGGC
GTTATGTGCTTTCTGCCGATATTTGGCCTGAACTGGAGCGTACTCAACCTGGAGCATGGGGACGTATTCAGTTGACTGAT
GCCATTGCTGAGTTGGCAAAAAAACAAGCAGTTGACGCAATGCTGATGACTGGGGACAGTTACGACTGCGGAAAGAAAAT
GGGTTATATGCAAGCGTTTGTGAAGTATGGGCTGCGTAACCTAAAAGAAGGGGCGAAGTTCCGTAAAGGGATTGAGAAGC
TGTTAAGCGAATAA

Protein sequence : 
MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQR
VKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTD
AIAELAKKQAVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 2e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
galF YP_006101425.1 regulatory protein GalF VFG0964 Protein 2e-48 43