Gene Information

Name : ugd (ECOK1_2258)
Accession : YP_006101413.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 2315113 - 2316279 bp
Length : 1167 bp
Strand : -
Note : identified by similarity to SP:P76373; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026

DNA sequence :
ATGAAAATTACCATTTCCGGTACTGGCTATGTAGGCTTGTCAAACGGGCTTCTAATCGCACAAAATCATGAGGTTGTGGC
ATTAGATATTTTACCGTCACGCGTTGCTATGCTGAATGATCGGATATCTCCTATTGTTGATAAGGAAATTCAGCAGTTTT
TGCAATCAGATAAAATACACTTTAATGCCACATTAGATAAAAATGAAGCCTACCGGGATGCTGATTATGTCATTATCGCC
ACTCCAACCGACTATGATCCTAAAACTAATTATTTCAATACATCCAGTGTAGAATCAGTAATTAAAGACGTAGTTGAGAT
AAATCCTTATGCGGTTATGGTAATCAAATCAACGGTTCCCGTTGGTTTTACCGCAGCGATGCATAAGAAATATCGCACTG
AAAATATTATTTTCTCTCCGGAATTTCTCCGTGAAGGTAAAGCTCTTTACGATAATCTCCATCCTTCACGTATTGTCATT
GGCGAGCGTTCAGAACGCGCAGAACGTTTTGCTTCGTTGTTACAGGAAGGCGCGATTAAGCAAAATATCCCGACCCTGTT
TACCGACTCCACTGAAGCAGAAGCGATTAAACTGTTTGCTAATACCTATCTGGCGATGCGCGTAGCATACTTTAATGAAC
TGGATAGCTATGCAGAAAGTTTAGGTCTGAATACTCGTCAGATTATCGAAGGTGTTTGTCTCGATCCGCGTATTGGCAAC
CATTACAACAATCCGTCGTTTGGCTATGGTGGTTATTGTCTACCGAAAGATACCAAGCAGTTACTGGCGAACTACCAGTC
TGTGCCGAATAACCTGATCTCGGCAATTGTCGATGCAAACCGCACGCGTAAAGACTTTATTGCCGATGCCATTTTGTCAC
GCAAGCCGCAAGTGGTGGGTATTTATCGTCTGATTATGAAGAGCGGTTCAGATAACTTCCGCGCGTCTTCCATTCAGGGG
ATTATGAAACGTATTAAGGCGAAAGGCGTTGAAGTGATCATCTACGAGCCGGTGATGAAAGAAGACTCATTCTTCAACTC
TCGCCTGGAACGTGATCTCGCCACCTTCAAACAACAAGCCGACGTCATTATCTCCAACCGTATGGCAGAAGAGCTTAAGG
ATGTGGCAGATAAGGTCTACACCCGCGATCTCTTTGGCAGCGACTAA

Protein sequence :
MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA
TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI
GERSERAERFASLLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGVEVIIYEPVMKEDSFFNSRLERDLATFKQQADVIISNRMAEELKDVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 9e-93 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_006101413.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 4e-102 55