Gene Information

Name : ECOK1_2230 (ECOK1_2230)
Accession : YP_006101386.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2292726 - 2293547 bp
Length : 822 bp
Strand : +
Note : identified by match to protein family HMM PF06067

DNA sequence :
ATGCGATTAGCAAGTCGTTTTGGTTATGCTGCAAACCAGATACGCCGTGACCGTCCACTGACACATGAAGAGCTGATGCA
CCATGTGCCGGGGATTTTCGGGGAAGAGAAACACACGTCCCGAAGCCAGAACTATACGTACATCCCCACCATCACCGTAC
TGGAAAGCCTGCAGCAGGAAGGTTTTCAGCCATTCTTCGCCTGCCAGACCTGTGTGCGCGACCCGGGCCGCCGGGGATAC
ACAAAACACATGCTGCGCCTGCGCCGTAACGGAGAGATAAACGGAGAGCATGTCCCTGAAATTATTCTGCTCAACTCTCA
TGACGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGCTGCGTCTGTGGTCAGTCTC
TGGGGGAAGTGCGTGTTCCACACCGGGGAGACGTAGTGGAGAAAGTTATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTT
GACCGGATAGAGGAGAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGC
ACTGACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACG
GTAAGGACCTGTGGAGTGCTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCAAAAGGA
AAACGTATCCATACCCGGGCCATTCACAGCATTGATACCGACATTAAGCTCAACCGTGCATTGTGGGTGATGGCAGAAAC
GATGCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYAANQIRRDRPLTHEELMHHVPGIFGEEKHTSRSQNYTYIPTITVLESLQQEGFQPFFACQTCVRDPGRRGY
TKHMLRLRRNGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGDVVEKVIEGAYEVVGVF
DRIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKG
KRIHTRAIHSIDTDIKLNRALWVMAETMLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 6e-117 97
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 6e-117 97
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-116 96
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-116 96
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-116 96
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-114 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 7e-115 94
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-112 93
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-112 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-112 92
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-110 90
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-110 90
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-107 88
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-109 87
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-106 87
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 6e-72 54
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 4e-72 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_2230 YP_006101386.1 hypothetical protein VFG0658 Protein 3e-117 97
ECOK1_2230 YP_006101386.1 hypothetical protein VFG1676 Protein 4e-115 94
ECOK1_2230 YP_006101386.1 hypothetical protein VFG1526 Protein 7e-108 88
ECOK1_2230 YP_006101386.1 hypothetical protein VFG1615 Protein 8e-107 87