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Name : ECOK1_2143 (ECOK1_2143) Accession : - Strain : Escherichia coli IHE3034 Genome accession: NC_017628 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 2148368 - 2149330 bp Length : 963 bp Strand : + Note : integrase; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF00589 DNA sequence : ATGCTGGCGCTGAATATCAACCCGGTACAGCAGCGGGCTGCTGTACGTGGCTCACGAACACCGGAGAAAGTTTTTAAAAA CGTGGCGCTGGCGTGGCATAAAAGTAACAGGAAATGGTCGCAGAACACCGCCGACCGTCTGCTTGCCAGCCTGAACAATC ACATCTTTCCGGTCATCGGGAACCTACCTGTATCAGAACTTAAACCCCGTCATTTCATTGACCTGCAGAAAGGGATCGAG GAAAAAGGTCTGCTGGAGGTTGCGTCCCGCACACGGCAGCACCTGAGTAACATAATACGCCATGCGGTCCATCAGGAGTT AATCGATACGAACCCTGCAGCAAACCTTGGCGGCGTGACCACACCTCCTGTCAGACGGCACTATCCTGCCCTGCCGCTGG AGCGGCTGCCTGAACTGCTTGAACGTATTGGGGCATATCATCAGGGCCGTGAACTGACCCGGCATGCCGTTCTGCTGATG CTGCATGTGTTCATTCGCTCCAGTGAACTGCGTTTCGCCCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGAT ACCCGCGACGCGAGAACCCATTATTGGCGTGCATTATTCCGGCCGCGGGGCAAAAATGCGAATGCCGCATATCGTCCCCC TCTCAGAACAGTCCATCGCCATTCTGAAACAGATTAAGGATATCACCGGTAATAATGAACTGATCTTCCCCGGCGACCAT AACCCGTATAAGCCAATGTGTGAAAACACGGTCAATAAGGCACTGCGGGTGATGGGTTACGACACGAAAAAGGATATCTG CGGTCACGGCTTCCGGGCAATGGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGACGCAGTAGAACGCCAGA TGAGTCATCAGGAGCGCAATACCGTGCGCATGGCTTATATTCATAAGGCAGAGCACCTGGAAGCCCGCAAAGCGATGATG TAG Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1051 | YP_853069.1 | phage integrase | Not tested | PAI IV APEC-O1 | DNA | 0.0 | 100 |
| int | ACR23166.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.9 |
| int | ACR23151.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.9 |
| int | ACR23152.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.9 |
| int | ACR23162.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.9 |
| int | ACR23163.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.9 |
| int | ACR23134.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| int | ACR23143.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| int | ACR23135.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| int | ACR23144.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| intB | ADN38949.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| int | ACR23146.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| int | ACR23147.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| int | ACR23148.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.6 |
| intB | ADN38952.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23165.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23149.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23141.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23133.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38968.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38960.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38953.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23158.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23142.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38969.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38961.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38954.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23159.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38962.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38947.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23136.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38963.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38955.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38948.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23161.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23153.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23145.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23137.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23129.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38964.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38956.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23138.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23130.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23122.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38965.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38957.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38950.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23139.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23131.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23123.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38966.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38958.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38951.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23164.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23140.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23132.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23124.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38967.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| intB | ADN38959.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | CAB59975.1 | integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | CAA08754.1 | integrase | Not tested | HPI | DNA | 0.0 | 99.4 |
| YPTB1602 | - | - | Not tested | HPI | DNA | 0.0 | 99.4 |
| int | ACR23157.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | ACR23125.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | ACR23150.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | ACR23167.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | ACR23154.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | ACR23155.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | ACR23156.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | YP_002346908.1 | integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| y2393 | NP_669700.1 | prophage integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int2 | NP_993013.1 | integrase | Not tested | HPI | DNA | 0.0 | 99.3 |
| int | CAA21384.1 | - | Not tested | HPI | DNA | 0.0 | 99.3 |
| intB | AAD37509.1 | P4-like integrase | Not tested | PAI IV 536 | DNA | 0.0 | 99.1 |
| int | ACR23128.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 98.9 |
| intB | - | - | Not tested | HPI | DNA | 0.0 | 98.4 |
| int | - | - | Not tested | HPI | DNA | 0.0 | 98.4 |
| int | - | integrase | Not tested | HPI | DNA | 0.0 | 98.3 |
| unnamed | AAD17660.1 | unknown | Not tested | HPI | DNA | 0.0 | 98.3 |
| int | CAB59974.1 | integrase | Not tested | HPI | DNA | 0.0 | 97.8 |
| int | ACR23127.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 97.6 |
| int | ACR23160.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 97.3 |
| int | ACR23126.1 | P4-like integrase | Not tested | HPI | DNA | 0.0 | 97 |
