Gene Information

Name : ECOK1_1660 (ECOK1_1660)
Accession : YP_006100850.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : periplasmic pilus chaperone family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1695409 - 1696119 bp
Length : 711 bp
Strand : -
Note : identified by similarity to SP:P62609; match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGCAAACTACGCGTACCCCCTACTCTGTTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTGCCATAGCAC
CATTGCCAACGCAGCTGTCGCACTTGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTATTGCCTGTCA
CGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCGGGTGACCAGAAAGATACCCAGTTTGTC
ATTACCCCACCGCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTTCGGATAATCAACGCCACTAATCATCAGTTACC
AGGCGACCGTGAAAGCCTGTTCTGGGTTAATGTTAAAGCTATCCCTGCTATGGAAAAAGACCAGAAGAATGAGAATACAT
TACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGCCCCACGCATCTGGCAATGGCACCTGAAGAAGCGCCTGCA
ATGCTTCGGTTTCGTCGCAGCGGTAGCAAACTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAACAAATATGAA
AGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTATCGGTGGATATCCCGCATGCTGTAACCG
GGGATATCAGTTTTCAGACAATCAATGATTACGGTGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MQTTRTPYSVSFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFV
ITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPA
MLRFRRSGSKLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 9e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-65 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_1660 YP_006100850.1 periplasmic pilus chaperone family protein VFG0911 Protein 3e-66 64
ECOK1_1660 YP_006100850.1 periplasmic pilus chaperone family protein VFG1644 Protein 6e-66 64
ECOK1_1660 YP_006100850.1 periplasmic pilus chaperone family protein VFG0875 Protein 5e-70 59
ECOK1_1660 YP_006100850.1 periplasmic pilus chaperone family protein VFG0445 Protein 6e-58 48