Gene Information

Name : tpx (ECOK1_1539)
Accession : YP_006100732.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.-
Position : 1551799 - 1552305 bp
Length : 507 bp
Strand : -
Note : identified by similarity to SP:P0A865; match to protein family HMM PF00578; match to protein family HMM PF08534

DNA sequence : 
ATGTCACAAACCGTTCATTTCCAGGGCAACCCGGTTACAGTCGCCAATTCCATCCCGCAGGCAGGTAGCAAAGCGCAGAC
TTTTACTCTCGTGGCAAAAGATCTGTCTGACGTCACCCTCGGTCAGTTTGCGGGTAAACGCAAAGTGCTGAACATTTTCC
CGAGTATTGATACCGGTGTTTGCGCCGCATCAGTACGTAAGTTTAACCAACTGGCAACCGAGATCGACAACACCGTTGTG
CTGTGTATCTCTGCCGATCTGCCGTTCGCCCAGTCTCGTTTCTGCGGCGCAGAAGGTCTGAACAACGTTATCACCCTCTC
CACTTTCCGTAACGCTGAATTCCTGCAAGCCTACGGTGTGGCAATTGCTGATGGCCCACTGAAAGGTCTGGCAGCGCGTG
CCGTTGTGGTTATTGATGAAAATGACAATGTGATTTTCAGCCAGCTGGTGGATGAAATCACCACCGAGCCGGATTACGAA
GCAGCTCTGGCTGTACTGAAAGCATAA

Protein sequence : 
MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVV
LCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
AALAVLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-36 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-36 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-36 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 6e-36 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_006100732.1 thiol peroxidase VFG0087 Protein 9e-37 48