Gene Information

Name : ECOK1_1134 (ECOK1_1134)
Accession : YP_006100341.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1183843 - 1184334 bp
Length : 492 bp
Strand : +
Note : identified by similarity to GB:ABB61173.1

DNA sequence :
ATGATGAAACTGGCCCTGACGCTGGAAGCCGACAGCGTTAACGTACAGGCACTGAACATGGGGCGCATTGTCGTTGACGT
CGATGGTATTGAGCTTGCTGAACTGATTAACGTGGTCTGCGATAACGGTCACTCCCTTCGTGTTGTTGATGAATCTGACC
GAGCCTCAACAGACTGCACGCCACCATTTGCTGCCCTGACCGGCATACGCTGCAGTACCGCGCATATCACGGCAAAAGAC
AACGCCTGGCTGTACTCGCTGTCGCATCAGACGAATGACACCGGCGAATCAGAATGGATTCATTTTACAGGCAGCGGATA
TCTGTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTTAAACGCCTGGGCCTGTCAAAAACGTTCCGCCGCCTGG
TTGTCACACTCATCCGACGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCGGGTTTACCCACT
TTCGACTGGTAA

Protein sequence :
MMKLALTLEADSVNVQALNMGRIVVDVDGIELAELINVVCDNGHSLRVVDESDRASTDCTPPFAALTGIRCSTAHITAKD
NAWLYSLSHQTNDTGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIRRYGVSLIHLDASAECLPGLPT
FDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 1e-69 99
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-62 98
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 4e-66 94
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 3e-68 93
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 3e-68 93
unnamed AAL08479.1 unknown Not tested SRL Protein 2e-67 93
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 2e-65 92
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 1e-67 92
unnamed AAC31487.1 L0008 Not tested LEE Protein 5e-68 91
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 7e-68 91
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 5e-68 91
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 7e-68 91
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-63 89
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 5e-62 87
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 4e-63 87
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 9e-61 85
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 5e-62 85
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-60 85
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-60 85
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 4e-61 84
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 4e-61 84
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 1e-59 83
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 4e-52 83
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 3e-54 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_1134 YP_006100341.1 hypothetical protein VFG1531 Protein 2e-66 94
ECOK1_1134 YP_006100341.1 hypothetical protein VFG1070 Protein 6e-68 93
ECOK1_1134 YP_006100341.1 hypothetical protein VFG1621 Protein 1e-65 92
ECOK1_1134 YP_006100341.1 hypothetical protein VFG1683 Protein 5e-68 92
ECOK1_1134 YP_006100341.1 hypothetical protein VFG0787 Protein 2e-68 91
ECOK1_1134 YP_006100341.1 hypothetical protein VFG0664 Protein 1e-61 84