Gene Information

Name : ECOK1_1128 (ECOK1_1128)
Accession : YP_006100335.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : antirestriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1181086 - 1181559 bp
Length : 474 bp
Strand : +
Note : identified by similarity to SP:P52603; match to protein family HMM PF03230

DNA sequence :
ATGAAAACATTGTCTCAGAACACCACCTCTTCGGCCTGTGCACCGGAGACTGGCCTGCAACAACTGGTTGCCACCATAGT
CCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCCGTGTCT
TCGGCTGGATGGACCGTCTGTGCGAAAACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGCGGGGCATTT
ATGGCCCCTGAACCGGATGACTATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGAAATGAG
CCCGGAAGCCGCCGGCATTGCCGCCTGTCTGATGATGTACAGTCATCACGCCTGCCGTACGGAGTGTTATGCCATGACGG
TTCATTATTACCGTCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATTATTGACTGA

Protein sequence :
MKTLSQNTTSSACAPETGLQQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCENYCGGIWNLYTLNNGGAF
MAPEPDDYDDETWVLFNAMNGNRAEMSPEAAGIAACLMMYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 4e-69 99
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 5e-64 97
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 5e-64 97
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 7e-65 97
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 7e-57 89
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-58 87
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-58 87
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-58 87
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 7e-58 87
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 7e-58 87
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 1e-60 87
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-61 87
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 3e-62 86
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 6e-63 86
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-57 86
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 7e-61 86
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 1e-61 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_1128 YP_006100335.1 antirestriction protein VFG0659 Protein 1e-64 97
ECOK1_1128 YP_006100335.1 antirestriction protein VFG1616 Protein 5e-61 87
ECOK1_1128 YP_006100335.1 antirestriction protein VFG1677 Protein 5e-62 87
ECOK1_1128 YP_006100335.1 antirestriction protein VFG1527 Protein 6e-62 84