Gene Information

Name : ECOK1_1124 (ECOK1_1124)
Accession : YP_006100331.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : putative GTPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1175504 - 1176376 bp
Length : 873 bp
Strand : +
Note : identified by match to protein family HMM PF01926

DNA sequence :
ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCACTTTCTTCCCTGCCTTACTCGCTTTCCCGTCACATCCTGGA
ACATCTGCGCAAACTCACCAGTCACGAACCCGTGATTGGCATTATGGGGAAAAGCGGGGCCGGTAAATCCTCACTCTGTA
ATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCGGCGCTTCCGTCTGAGT
GGCCATGGTCACAACATGGTTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCT
GTACCGTGACATTCTGCCTGAACTGGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGT
ATTTCTGGCGACACATCCTGCACCGGGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGACAAAACGGAGCCCTGC
CATGAATGGGATATGGCCGGTATTCAGCCTTCTCCTGCACAGGCACAGAACATTCGCGAAAAAACGGAGGCGGTATTCCG
TCTGTTCCGGCCCGTACATCCGGTTGTTGCCGTATCGGTCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA
TGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGCCTGCAGGACGAGCTGCGCACGGAATCTGTCCGCGCT
CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCATG
CACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGCGCTGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS
GHGHNMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
HEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSVRTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRA
QAREQFTGAVDRIFDTAESVCIASVACTVLRAVRDTVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 9e-133 99
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 9e-133 99
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 1e-132 99
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 8e-133 98
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 2e-131 98
unnamed AAL08471.1 unknown Not tested SRL Protein 8e-133 98
unnamed AAL99256.1 unknown Not tested LEE Protein 8e-131 97
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 4e-130 97
Z1210 NP_286745.1 histone Not tested TAI Protein 4e-130 97
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 4e-130 97
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 1e-129 96
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 2e-129 96
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-129 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_1124 YP_006100331.1 putative GTPase VFG1062 Protein 4e-133 98
ECOK1_1124 YP_006100331.1 putative GTPase VFG1674 Protein 9e-132 98
ECOK1_1124 YP_006100331.1 putative GTPase VFG0654 Protein 7e-130 96