Gene Information

Name : ECOK1_1111 (ECOK1_1111)
Accession : YP_006100319.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : IroB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1159683 - 1160798 bp
Length : 1116 bp
Strand : -
Note : identified by match to protein family HMM PF06722

DNA sequence :
ATGCGTATTTTGTTTGTAGGCCCGCCTCTCTATGGGCTGTTGTATCCTGTGCTGTCTCTGGCGCAGGCATTTCGCGTTAA
CGGTCATGAAGTGCTGATCGCCAGTGGAGGACAATTCGCACAAAAAGCGGCAGAGGCCGGGTTGGTGGTGTTTGACGCCG
CACCCGGTCTGGATTCCGAAGCTGGTTACCGCCACCATGAGGCACAGCGGAAAAAAAGTAATATCGGAACCCAAATGGGC
AACTTCTCATTCTTCAGCGAAGAAATGGCCGACCATCTGGTGGAGTTTGCCGGACACTGGCGGCCTGACCTCATCATCTA
CCCTCCGCTCGGAGTCATCGGGCCGCTGATTGCCGCCAAATATGATATACCGGTCGTGATGCAAACCGTAGGCTTCGGCC
ATACCCCCTGGCATATCAGGGGTGTAACGCGTTCGCTCACGGACGCCTATCGTCGCCACAATGTGGGGGCCACACCACGT
GATATGGCCTGGATCGACGTAACACCGCCGAGTATGAGCATTCTGGAAAACGACGGTGAACCCATTATTCCGATGCAGTA
CGTCCCGTATAACGGTGGCGCGGTGTGGGAACCATGGTGGGAGAGAAGGCCCGAGCGTAAACGTCTGCTGGTGAGTCTCG
GCACTGTCAAACCGATGGTTGACGGCCTTGATCTAATCGCCTGGGTTATGGATTCTGCCAGTGAGGTCGATGCCGAGATC
ATCCTGCATATTTCAGCCAATGCGCGGTCCGATTTGCGCTCGCTGCCGTCAAATGTTCGCCTGGTTGACTGGATACCCAT
GGGTGTCTTCCTCAACGGCGCAGATGGTTTCATTCATCATGGCGGAGCAGGCAATACCCTGACAGCGCTACACGCTGGTA
TTCCACAAATCGTCTTCGGCCAGGGAGCCGATCGCCCGGTAAATGCCCGCGTTGTTGCCGAACGCGGCTGCGGGATTATC
CCTGGCGACGTCGGCCTGTCGAGTAACATGATCAATGCTTTCCTCAACAATCGCTCACTTCGCAAAGCCTCTGAAGAGGT
AGCAGCGGAAATGGCGGCGCAACCCTGCCCAGGTGAAGTGGCGAAAAGCCTGATCACAATGGTACAGAAAGGGTAA

Protein sequence :
MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGQFAQKAAEAGLVVFDAAPGLDSEAGYRHHEAQRKKSNIGTQMG
NFSFFSEEMADHLVEFAGHWRPDLIIYPPLGVIGPLIAAKYDIPVVMQTVGFGHTPWHIRGVTRSLTDAYRRHNVGATPR
DMAWIDVTPPSMSILENDGEPIIPMQYVPYNGGAVWEPWWERRPERKRLLVSLGTVKPMVDGLDLIAWVMDSASEVDAEI
ILHISANARSDLRSLPSNVRLVDWIPMGVFLNGADGFIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARVVAERGCGII
PGDVGLSSNMINAFLNNRSLRKASEEVAAEMAAQPCPGEVAKSLITMVQKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroB CAD66179.1 IroB protein Virulence PAI III 536 Protein 7e-158 100
Z1190 NP_286725.1 glucosyltransferase Not tested TAI Protein 6e-117 71
join NP_287133.1 glycosyl transferase Not tested TAI Protein 4e-116 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_1111 YP_006100319.1 IroB protein VFG1654 Protein 4e-158 100