Gene Information

Name : EC042_0734 (EC042_0734)
Accession : YP_006095051.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 810983 - 811720 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCACGCCGCACTACAACCCGA
TCGCACTCGCATTGTGTTTAACGCTAATGATAAAGCCACCAGCCTGCGAGTGGATAATCGTAGCGATAAACTCCCCTACC
TCGCTTATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGATGATCTTCTGGTTGCCCTGCCACCGATACAACGTCTG
GAACCGAAAGCAACAACGCAGGTACGGATAGTAAAGCAAGTCTCGACCACAAAATTACCGGGCGATCGCGAAACGCTATT
TTTCTACAATATGCGTGAAATTCCTCCCGCCCCGGAAAAAAACAGCGGCCATGCCGTTCTGCAGGTCGCCATCCAGAGTC
GTATCAAAGTGTTCTGGAGACCGTCCGCGTTACGCAAGAAAGCAGGAGAAAAAGTCGAGCTACAGTTACAAGTCAGCCAG
CAGGGCAATCAACTTAACTTAAAAAACCCGACCGGCTATTACCTGACAATCGCCTACCTGGGACGAAATGAGCAAGGTAT
TCTCCCGGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACAGTAATTACAAACACCGGAAGTTATAGCGGCAGGCAGT
TTTATCTCGGTTATATGGATGATTACGGCGCGTTACGCATGACGACGCTCAACTGCAGCGGACAATGCCGTTTACAAGCA
GTGGAGGCGAAGAAATGA

Protein sequence : 
MKMTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRL
EPKATTQVRIVKQVSTTKLPGDRETLFFYNMREIPPAPEKNSGHAVLQVAIQSRIKVFWRPSALRKKAGEKVELQLQVSQ
QGNQLNLKNPTGYYLTIAYLGRNEQGILPGFKTVMVAPFSTVITNTGSYSGRQFYLGYMDDYGALRMTTLNCSGQCRLQA
VEAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-36 41
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-36 41
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-36 41
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-36 41
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 2e-36 41
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_0734 YP_006095051.1 fimbrial chaperone VFG1547 Protein 8e-37 41
EC042_0734 YP_006095051.1 fimbrial chaperone VFG0896 Protein 1e-36 41