Gene Information

Name : EC042_4809 (EC042_4809)
Accession : YP_006099054.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5149063 - 5149539 bp
Length : 477 bp
Strand : +
Note : -

DNA sequence :
ATGAGGTCCTGCTCATCAACGAATACACCTTTACCGAAGCCGGTCTGCGCGCCGGCTGACCCGTCATCGTTAAACTATCA
TTCACCGATTTTCTGTGAGGATTTTATCGTGTCAGACACACTTTCCGGGACAACGCATCCCGATGACAATGACGACCATC
CCTGGTGGGGACTACCCTGCACAGTGACGCCCTGTTTCGGCGCCCGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTT
GCCGACCGTGCCGGTATCAGAGGCCGGTTCAGAGATGCGGATGCGTACCCTCTGGACCAGGCCTTTCCGCTGCTGATGAA
ACAACTGGAATTAATGCTCACCAGTGGTGAACTGAATCCCCGCCATCAGCATACCGTGACACTGTATGCGAAGGGGCTGA
CCTGTGAAGCCGACACCCTCGGCTCCTGTGGTTACGTTTATCTGGCTGTTTATCCGACACCTGAAACGAAAAAGTAA

Protein sequence :
MRSCSSTNTPLPKPVCAPADPSSLNYHSPIFCEDFIVSDTLSGTTHPDDNDDHPWWGLPCTVTPCFGARLVQEGNRLHYL
ADRAGIRGRFRDADAYPLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCEADTLGSCGYVYLAVYPTPETKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-51 96
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-54 95
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 5e-66 94
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 2e-51 94
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 2e-51 94
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 1e-54 94
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-55 94
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-55 94
unnamed AAL57576.1 unknown Not tested LEE Protein 9e-66 93
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 1e-48 91
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 1e-48 91
Z1220 NP_286755.1 structural protein Not tested TAI Protein 8e-48 91
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 3e-50 91
Z1658 NP_287161.1 structural protein Not tested TAI Protein 8e-48 91
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-49 91
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-49 91
unnamed AAL08477.1 unknown Not tested SRL Protein 1e-47 89
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 9e-47 88
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 7e-60 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_4809 YP_006099054.1 hypothetical protein VFG1619 Protein 9e-52 94
EC042_4809 YP_006099054.1 hypothetical protein VFG1681 Protein 5e-49 91
EC042_4809 YP_006099054.1 hypothetical protein VFG0662 Protein 4e-50 91
EC042_4809 YP_006099054.1 hypothetical protein VFG1068 Protein 5e-48 89