Gene Information

Name : EC042_4802 (EC042_4802)
Accession : YP_006099047.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : putative ATP/GTP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5142124 - 5142996 bp
Length : 873 bp
Strand : +
Note : -

DNA sequence :
ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCTCTCCTCCCTGCCTTACTCACTTTCCCGTCACATCCAGGA
ACATCTGCGCAAACTCACCAGTCACGAACCCGTGATTGGCATTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTA
ATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCGGCGCTTCCGTCTGAGT
GGCCACGGTCACAGCATGATTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCT
GTACCGTGACATTCTGCCTGAACTTGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGT
ATTTCTGGCGACACATACTGCACCGGGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGACAAAACGGAGCCCTGC
CATGAATGGGATATGGCCGGCATTCAGCCTTCTCCCGCACAGGCACAGAACATTCGTGAGAAAACAGATGCGGTATTCCG
GCTGTTCCGGCCCGTACATCCGGTTGTGGCCGTATCGGCCTGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA
TGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGCCTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCT
CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACG
CACGGTTCTGCGTGCCGTCCGTGACTCGGTGGTCTCTGTTGCCCGCGCTGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MNPSDAIEAIEKPLSSLPYSLSRHIQEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS
GHGHSMIITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
HEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHPVVAVSACTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS
QAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDSVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 3e-124 99
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 3e-124 99
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 3e-124 99
unnamed AAL99256.1 unknown Not tested LEE Protein 2e-122 98
unnamed AAL08471.1 unknown Not tested SRL Protein 4e-124 98
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 6e-124 98
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 3e-123 97
Z1210 NP_286745.1 histone Not tested TAI Protein 3e-121 97
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 3e-121 97
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-121 97
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 3e-121 96
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 7e-122 96
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 2e-121 96
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 3e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_4802 YP_006099047.1 putative ATP/GTP-binding protein VFG1062 Protein 2e-124 98
EC042_4802 YP_006099047.1 putative ATP/GTP-binding protein VFG1674 Protein 2e-123 97
EC042_4802 YP_006099047.1 putative ATP/GTP-binding protein VFG0654 Protein 1e-121 96
EC042_4802 YP_006099047.1 putative ATP/GTP-binding protein VFG1612 Protein 2e-43 41