Gene Information

Name : EC042_4797 (EC042_4797)
Accession : YP_006099043.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : putative regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5138945 - 5139223 bp
Length : 279 bp
Strand : +
Note : -

DNA sequence :
ATGCCGGTGAAGGTGGCGCGCTGTTTTCATGACCACACCGGCTGGTTTAACAACATCCGGAGGAACATTCTCATGGCTAC
CCCAGTTTCACTGATGGATGACCAGATGGTCGACATGGCATTTATCACTCAACTGACCGGCCTGACAGATAAGTGGTTTT
ACAGGCTCATCAGGGATGGGGCCTTTCCGGCTCCCATCAAGCTGGGCCGCAGCTCCCGCTGGCTGAAAAGTGAAGTGGAA
GCCTGGCTGCAGGCGCGTATTGCACAGCCCCGCCCGTAA

Protein sequence :
MPVKVARCFHDHTGWFNNIRRNILMATPVSLMDDQMVDMAFITQLTGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEVE
AWLQARIAQPRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08466.1 unknown Not tested SRL Protein 1e-39 100
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 3e-26 95
unnamed ADD91712.1 putative transcriptional regulator AlpA Not tested PAI-I AL862 Protein 7e-38 93
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 1e-25 93
unnamed CAI43835.1 hypothetical protein Not tested LEE Protein 7e-38 93
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 2e-25 90
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 2e-25 90
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 1e-25 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_4797 YP_006099043.1 putative regulatory protein VFG1057 Protein 6e-40 100
EC042_4797 YP_006099043.1 putative regulatory protein VFG0651 Protein 6e-26 90