|
Name : EC042_4577 (EC042_4577) Accession : YP_006098849.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : putative type VI secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 4908894 - 4911443 bp Length : 2550 bp Strand : + Note : - DNA sequence : GTGAGTATCTATCTGAAACCAATTATTAATAAATTAACTCCAGAAAGTCGAAATACTCTGGATTCTGCAATTAATTACGC AATATCAAGGTCACATCATGAAGTAGACTGTCTACATCTTCTATGGAAGTTATTGCAGGAACATAAATATATAGCCGAAG TGCTTTATGAGCAGTCCTTATTTAATCCTGAGTGGGTTCTTAATGCTATTGAAAGTGAACTTATCCGTATCAATACAGTA CCACAATCCTCACCTGTATTTTCTGAGTCGATGCAGACTCTACTGGAGAAAACATGGATACATGCCAGTACTAAATGGCA AATCGATCATATAGATATCCCTGTCTTTTTGAGTACTATGATTAATTTCAGAGATTCAATATTTCCTCTCAATGTTTCTG ATGCGTTATGTTGTGATATGGATGTAGCTGAGGAGTTACTTATCTCTTTTTCAGACGAAGCAGAGCATTCTGCTTCTCAT CGTCCCACCGATAGGTCTTCACATGAATATCTCAGTAAATATACTGAGAATCTCTCTCTGCGGGCAGAAACAGGTAAATT AGATCCGGTTACTGGCAGAGAGAAGGAAGTCAGACAACTTATCGATATTTTGCTTCGTCGCAGACAGAATAATCCAATAC TGACCGGTGAACCGGGAGTAGGGAAAAGTAGTATAGTAGAAGGTTTAGCACTGCAAATTGCGTCTGGCCGTGTGCCTGAT GTACTGAAGAATGTCCGGATCCATGCCCTTGATATGGGGGCTCTGCTTGCGGGAGCCAGTGTCAGAGGGGAATTCGAAAA TCGCCTAAAATCACTGTTGACCGAACTTAATTCTTTGGATGGCACAGCTATTTTGTTTATTGATGAGGCTCATTCCCTTA TCGGTGCAGGAGGACTTCCGGGACAGACTGATGCAGCTAATTTGCTTAAGCCTGCTCTTGCCCGTGGAGAATTGCGCATT ATAGCCGCAACGACATGGGGAGAATATAAAAAGTATTTTGAAAAGGATGGGGCGTTAGCCCGGCGTTTTCAGATAGTAAA AGTAGCAGAGCCAAATCAGGATGTCACAGCGGAAATGCTACGTTCTCTTTTGCCCATGATGGAAAAACACCATAATGTTT CTATCAGGGAAGAAGCAATAACTGCAACGGTACATCTATCAGACCGTTATCTGCATGGGCGCCGTCAACCAGATAAATCT GTAAGTCTGTTAGATACAGCTTGTTCTCGGGTTGCTGTATCTCAGTCTACATCACCAGATGCCATTCAGGATGTCGAAGC TTCATTGGTAAGATACCAAGGGGAACTTGCGCTGCTGACACAGGAAAGGTCAGATGTTTTGCGTCAGGAAATGCTTGCAA ATAAAATTGCTCAACTTGAGGAGGAGCTTGAGCAACTCAAATCAGCGTGGCGTCATCAAAGTGAACTGGTTGCAAAAATA CAAAGTTCAGATGATATTTCATCAAAGAATATGTACAGAAAAGAACTGGAAAGTGCATATAAGAAAGACAGTCCTATGGT TTTTGAGTGTGTGGATAAAAATTGTGTTGCTGATGTTGTTTCTGGGTGGACAGGTGTTCCACTGGGTGTATGCCTTGATG GTGAACAACAAAAAGCATCCGGTCTGTTAAGATGCTTGGAGCAGCGAGTTTTGGGGCAGCGATATGCTATGTCCGCTATT GCATCACAAGTTCTTATTTGTCGGGCAGATCTTAAAGATCCTGTAAAACCTGATGGGGTATTTTTACTTGCGGGCCCTTC TGGCACAGGCAAAACGGAGACAGCCAGGGCGCTGGCCGAGTTTGTTTATGGGGATGAGAATAAACTCATCACGATTAATA TGACTGAATTTCAGGAAGCTCACACTGTTTCCACTCTGAAGGGGGCACCTCCTGGATATGTTGGTTTTGGTCAGGGAGGG ACTCTTACTGAAAGGGTGAGTCATAATCCATACAGTGTTATTCTGCTTGATGAAATTGAAAAAGCACATCCGGATGTCCT GGAGTTCTTCTTCCAGATATTTGACTCAGGTATTATCGAGGATGCTGAAGGTAAGATGGTGTCTTTCAGAGATTGTCTCA TAATAATGACATCAAACTTTGCCAGTGAAAATATCACAAACATATGGAATGATGGTGAGACAAATAGAGACAGAATAAAA GAAATGCTTCTTCCTTTGTTTAATGAGCATTTTGGGGCGGCATTTATGGGGAGAACTAACTTAATTCCGTTCACACCGTT GCATTCCAAAACACTGAGAGATATCGTACTCATTAAAATTGATAAGATCTGCCAACGTTTTGAACAGGCATCAGGTCAGA TGTATAAGATAGAATACAATGATTCTCTTATTGACTGGATTACACATCATTGTCAATGTGATAAGTCTGGAGCTAGGGAT ATAGACTCAGTACTTAACAGCACGGTTCTTCCTGTCTTGGCCAGATATTTGACTGACTCTGAAGATAATAGAACCCCCAA GAAAATAAGAATATCAGTAAGGAAAAATAACATTACATTACGTAGTTCGCAATTTGCAACTCGTAATTGA Protein sequence : MSIYLKPIINKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLNAIESELIRINTV PQSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASH RPTDRSSHEYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTDAANLLKPALARGELRI IAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKS VSLLDTACSRVAVSQSTSPDAIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKI QSSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMSAI ASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGG TLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIK EMLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSGARD IDSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRKNNITLRSSQFATRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-125 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC042_4577 | YP_006098849.1 | putative type VI secretion protein | VFG2076 | Protein | 1e-132 | 45 |
