Gene Information

Name : EC042_4554 (EC042_4554)
Accession : YP_006098831.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : ParB-like nuclease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4888303 - 4888947 bp
Length : 645 bp
Strand : +
Note : -

DNA sequence :
ATGGGGGATTCTGTGACACCTGAAGTGGAGGTACTGAGTGACATGATTCGTCAGTACTTCAGCCAGGAACGACCAGAAGA
AGAGGCCATACAGGCCCTTAATCACCTGCGCAGGGTGCTTCATGAGGTCAGTCCTTTTGCACAGGAGCCTGTGGACTGTG
TGCTGTGGGTGAAAGCGGATGAGGTGGTGGCTAACGATTATAACCCCAATGTCATGGCGCCGGGTGAGAAGAAACTGCTG
AAACATTCACTGGAGCAGGATGGGTTCACGCAGCCTGTGGTTGTCTCGGAAGAGAAAGAGCATTATCTGGTCGTGGATGG
TTTTCATCGTCAGTTACTGGGCAGGGAAGCAGGTACGGGAGAACGTCTGAAGGGCTGGTTGCCAGTGACCTGTATTAATC
CGGAAAGAAAGGGACAGGCTTCACGTATTGCAGCGACCATTCGACATAACCGGGCCAGGGGTAAACACCAGATAACCTCT
ATGTCCGATATTGTCAGGGATCTTTCACGCCTGGGCTGGATGGATGAACGCATTGGCACTGAGCTGGGTATGGACCAGGA
TGAAGTACTGAGACTGAAACAGATTAGCGGGCTGACGGAATTGTTTCAGGAAGAGGACTTCAGCCCGGCATGGACGGTTC
GCTGA

Protein sequence :
MGDSVTPEVEVLSDMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLL
KHSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGREAGTGERLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITS
MSDIVRDLSRLGWMDERIGTELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-93 94
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-93 94
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-94 94
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-93 93
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-93 93
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-79 93
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-79 93
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-79 93
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 1e-78 81
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 3e-79 80
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-29 47
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 3e-28 46
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 4e-28 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_4554 YP_006098831.1 ParB-like nuclease VFG1505 Protein 7e-95 94