Gene Information

Name : EC042_4553 (EC042_4553)
Accession : YP_006098830.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4887086 - 4888318 bp
Length : 1233 bp
Strand : +
Note : -

DNA sequence :
ATGCGTGATCATTTAATGACAGACAAAATTTGGCTTTGTACTAATGTTCTGCGTGCAGCAATTGCTCGTATTGAGTGGAT
TTTTGAAACATTTCCATCAGTTTGTCTCTCTTTTTCCGGTGGTAAAGATTCCACCGTGCTTTTCCATCTTTTGGCTGATG
TGGCCCGCAGGAAAAAACGTCGTTTCTCTGTACTGTTCATTGACTGGGAGGCTCAGTACCAGTGCACCATTGAACATATT
CAGAAGATGCGGGAAATGTACCATGATGTGACGGAAACCTTTTACTGGGTGGCACTTCCCCTGACCACGGTAAACGGTGT
TTCTCAGTTTCAGCCGGAGTGGATATGCTGGGAGTCTGGTGTGAAGTGGGTTCGCCAGCCACCGGAGGGGGCCATTACAG
ATATGGCGTATTTTCCCTTTTACCGGTATGCCATGACGTTTGAAGAATTTGTTCCGGCATTTTCTTCCTGGTTTGCAGAC
AATAAATGTGGTGTGGCAGTACTGACCGGTGTCCGTGCGGATGAGTCCCTTAACCGGTTCATGGGACTGGTATCCCAGCG
CAAACTGAGATACGCCGATGATAAGCCCTGGACCACGGCATCGCCTGAAGGGTTTTACTACACCATGTATCCGCTGTATG
ACTGGAAAACTCGTGATATCTGGATATATCACACCAGAACCCGTGCCATCTACAATCCCCTGTATGACCTGATGTACCGT
GCCGGCGTACCGTTACGCAACATGCGTGTCTGTGAACCTTTTGGTCCTGAACAACGTAAGGGACTGTGGCTTTACCATGT
TCTGGAGCCGGAAACCTGGGCCAGGATGTGTGAGCGGGTGTCAGGCGCTGCCAGCGGGGCGCTTTATGCCAATGAAAGCG
GTGCCTATTTTGCCCTGCGTAAACGTATATCAAAACCGGCCCATCATACCTGGCGCAGCTATGCGATGTTCCTGCTGGAT
GTGATGCCGGAAAGAACGGCAGAACATTACCGTAATAAAATTGCTGTCTACCTGCGCTGGTATCAGACGCGGGGCTTCCC
GGATGACATCCCGGACGAACAGGAGAATGATCTGGGGAGCCGGGATATTCCGTCCTGGCGACGTATCTGTAAAACACTCA
TAAAGAATGATTTCTGGTGCCGGACTCTCTCCTTCAGTCCGAACAAACCCCGGCACTATGAACGTTACCTGCAGCGTATG
AAGGAAAGGAGGAATGAATGGGGGATTCTGTGA

Protein sequence :
MRDHLMTDKIWLCTNVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLLADVARRKKRRFSVLFIDWEAQYQCTIEHI
QKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWESGVKWVRQPPEGAITDMAYFPFYRYAMTFEEFVPAFSSWFAD
NKCGVAVLTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKTRDIWIYHTRTRAIYNPLYDLMYR
AGVPLRNMRVCEPFGPEQRKGLWLYHVLEPETWARMCERVSGAASGALYANESGAYFALRKRISKPAHHTWRSYAMFLLD
VMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRTLSFSPNKPRHYERYLQRM
KERRNEWGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 0.0 97
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 97
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 97
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 0.0 94
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 0.0 94
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 0.0 94
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 0.0 94
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-180 92
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 7e-175 85
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 6e-175 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_4553 YP_006098830.1 hypothetical protein VFG1504 Protein 0.0 92