Gene Information

Name : EC042_4549 (EC042_4549)
Accession : YP_006098826.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4883710 - 4884015 bp
Length : 306 bp
Strand : +
Note : Similar to Escherichia coli hypothetical protein S13 s13 SWALL:AAQ19136 (EMBL:AY275838) (101 aa) fasta scores: E(): 2.2e-37, 89.1% id in 101 aa; Note the CDS s13 is located on the hybrid genomic island of the Verocytotoxin-Producing Escherichia coli CL3.

DNA sequence :
ATGAATCCATTATTCAGTGACATTCAGATGCGTCTTTTTCATCTTAATCATTCCCCGTATTCCTGGTACTGGAATGTCAG
ATTCAGACCCCAGGAAGCCGTATATATTGGCAACGATACCTGTCATATCACCATTACCTGTAATCAGTCAGGTTTTCATT
TAACCAGGGACGGACAACGGCTGTTCACTGAGCGTTATATCAGAAACCTTAATGAGCTGTTGCCGGTTCTGAAACGGCGG
TGGGATGTGACACCGGCAATTATCCGCGCGGTGGAATACCTTTCCCGGGTACCGGTATCACACTGA

Protein sequence :
MNPLFSDIQMRLFHLNHSPYSWYWNVRFRPQEAVYIGNDTCHITITCNQSGFHLTRDGQRLFTERYIRNLNELLPVLKRR
WDVTPAIIRAVEYLSRVPVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S13 AAQ19136.1 hypothetical protein Not tested PAI I CL3 Protein 5e-37 90