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Name : EC042_4525 (EC042_4525) Accession : YP_006098802.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : putative type VI secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 4853394 - 4854938 bp Length : 1545 bp Strand : + Note : - DNA sequence : ATGCTGATGTCTGTACAGAAAGAAAAGAACGTTGCAGAGAGCGTGGTATCTGAAGCGCATGCCGGCGACAGCGTATATGC TTCCCTGTTTGAAAAAATTAACCTGAGTCCGGTATCTGCCCTGAGTGCACTGGATATCTGGCAGGATCCACAGGCCATGT CAGAAGCATCTGCAGATGAACGTCTGACGGCAGGGATGCAGGTGTTTATGGAGTGTCTGGCAAAAGCCGGCACGCAGGTG GAAAAACTCGATAAAGCGCTGATTGACCATCATATTGCAGAGCTTGATTATCAGATCAGCCGTCAACTGGATGCTGTGCT TCATCATCCGGAATTTCAGAAAGTGGAGTCGCTGTGGCGGGGCGTGAAGTCCCTGGTGGATAAAACGGACTTCCGCCGTA ATGTGAAAATTGAGCTGCTGGATCTGTCCAAAGACGATCTGCGTCAGGATTTTGAGGATGCGCCGGAAATTATTCAGAGC GGCCTTTATCTGCAGACCTATGTGGCTGAGTATGACACGCCGGGTGGTGAGCCCATTGCCGCCCTGGTTTCAGCCTGGGA GTTTGATGCATCTGCACAGGACGTGGCGTTGCTGAAAAATATTTCCCGGGTGGCGGCATCTGCACATATGCCGTTTATTG GTTCAGTTGGCCCGGCGTTCTTCCAGAAAGAAACCATGGAAGAGGTGGCTGCCATCAAGGATATTGGCAACCACTTTGAG CGTGCCGAGTACATCAAGTGGAATGCTTTCCGTGAGACGGACGATGCCCGCTATATTGGCCTGGTGATGCCCCGTGTACT GGGACGCCTGCCGTATGGCCCGGATACCGTACCTGTCCGCAGCTTTAACTATGTTGAAGAGGTGAAAGGACCGGACCACC ATAAATATCTCTGGACGAACGCGTCTTTTGCCTTTGCAGCCAACATGGTGCGCAGTTTTGTCACCAACGGCTGGTGTGTT CAGATCCGTGGGCCTCAGGCCGGTGGTGCGGTGCAGGATTTGCCAATCCATTTGTATGATCTGGGAACCGGTAATCAGGT CAAAATTCCGTCAGAGGTGATGATCCCGGAAACGCGGGAGTTTGAATTCGCGAATCTGGGCTTTATTCCGCTCTCTTACT ACAAGAACCGGGATTATGCCTGCTTCTTCTCTGCTAACTCCGCCCAGAAACCGGCGCTGTACGATACGCCGGATGCAACG GCGAACAGTCGTATTAATGCCCGTCTTCCCTATATCTTCCTGCTGTCCCGTATTGCGCATTACCTGAAGATCATTCAGCG GGAAAATATCGGTACCACCAAAGATCGCCGTCTGCTTGAGCTGGAGCTGAATAACTGGATCCGGGGACTGGTGACGGAGA TGACCGATCCGGGTGATGAACTGCAGGCCTCGCATCCGCTGCGTGACGGAAAAGTGGTGGTGGAAGATATCGAAGACAAT CCGGGATTCTTCCGCGTGAAACTCTACGCCGTACCGCATTTCCAGGTAGAAGGTATGGACGTCAGCCTGTCACTGGTTTC GCAGATGCCGAAGGCAAAAGCGTAA Protein sequence : MLMSVQKEKNVAESVVSEAHAGDSVYASLFEKINLSPVSALSALDIWQDPQAMSEASADERLTAGMQVFMECLAKAGTQV EKLDKALIDHHIAELDYQISRQLDAVLHHPEFQKVESLWRGVKSLVDKTDFRRNVKIELLDLSKDDLRQDFEDAPEIIQS GLYLQTYVAEYDTPGGEPIAALVSAWEFDASAQDVALLKNISRVAASAHMPFIGSVGPAFFQKETMEEVAAIKDIGNHFE RAEYIKWNAFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHHKYLWTNASFAFAANMVRSFVTNGWCV QIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYACFFSANSAQKPALYDTPDAT ANSRINARLPYIFLLSRIAHYLKIIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPGDELQASHPLRDGKVVVEDIEDN PGFFRVKLYAVPHFQVEGMDVSLSLVSQMPKAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-99 | 45 |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-99 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC042_4525 | YP_006098802.1 | putative type VI secretion protein | VFG2475 | Protein | 1e-111 | 49 |
| EC042_4525 | YP_006098802.1 | putative type VI secretion protein | VFG2093 | Protein | 3e-105 | 46 |
| EC042_4525 | YP_006098802.1 | putative type VI secretion protein | VFG2070 | Protein | 4e-85 | 43 |
