Gene Information

Name : EC042_4519 (EC042_4519)
Accession : YP_006098797.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4850065 - 4850454 bp
Length : 390 bp
Strand : +
Note : -

DNA sequence :
ATGACGATGTACGCAAAATCCTTTCTCGCACTTGATGGCAACGGACGTCTGACCGGTGCCCGTACCGCACAGACAGCGCC
ATACGATCGTTACACCTGCCACCTCTGTGGCAGTGCTCTCAGATACCACCCGCAATACGACACTGAACGTCCCTGGTTTG
AACACACTGACGACGGGCTGACTGAGCATGGTCATGAGTGCCCTTATGTCAGACCGGAGCGCAGAGAAATACTGTTGATT
AAACGCTTACGGCAATTCGTACCGGACGCCTTACCCGTAGTGCGTAAAGCCAGCTGGCACTGCAGACAATGTCACCACGA
TTATTATGGGGAGCAGTACTGCACACACTGTCATACAGGGCGCTTCAGTGAGGAGGTGGTTGCAGAATGA

Protein sequence :
MTMYAKSFLALDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQYDTERPWFEHTDDGLTEHGHECPYVRPERREILLI
KRLRQFVPDALPVVRKASWHCRQCHHDYYGEQYCTHCHTGRFSEEVVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 2e-48 95
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-45 95
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 1e-45 94
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 7e-47 93
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 1e-46 93
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 1e-46 93
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 4e-45 90
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 2e-43 90
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-43 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_4519 YP_006098797.1 hypothetical protein VFG0645 Protein 3e-47 93