Gene Information

Name : EC042_4515 (EC042_4515)
Accession : YP_006098794.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : putative phage-related regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4847600 - 4847878 bp
Length : 279 bp
Strand : -
Note : -

DNA sequence :
ATGCCAGTGAAGGTGGTGCGTTTTTCATCACCAACGCCGGTTGAGATTAACAACATCCGGAGGAACATTTTCATGAATAC
CCCAGTTTCGCTGATGGATGACCAGATGGTCGACATGGCGTTTATCACTCAACTGACCGGCTTAACCGATAAGTGGTTTT
ACAAGCTCATCAAGGATGGTGCCTTTCCGGCCCCCATCAAACTCGGCCGCAGCTCCCGATGGCTGAAAAGTGAAGTGGAA
GCCTGGTTGCAGGCGCGTATTGCACAATCCCGTCCGTAA

Protein sequence :
MPVKVVRFSSPTPVEINNIRRNIFMNTPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGAFPAPIKLGRSSRWLKSEVE
AWLQARIAQSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 3e-27 99
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 1e-26 96
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 9e-27 96
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 9e-27 96
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 6e-27 96
unnamed CAI43835.1 hypothetical protein Not tested LEE Protein 1e-30 86
unnamed ADD91712.1 putative transcriptional regulator AlpA Not tested PAI-I AL862 Protein 1e-30 86
unnamed AAL08466.1 unknown Not tested SRL Protein 2e-30 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_4515 YP_006098794.1 putative phage-related regulatory protein VFG0651 Protein 2e-27 96
EC042_4515 YP_006098794.1 putative phage-related regulatory protein VFG1057 Protein 8e-31 84