|
Name : flu2 (EC042_4511) Accession : YP_006098789.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : antigen 43 autotransporter (fluffing protein) [contains: antigen 4 alpha chain; antigen 43 beta chain] Function : - COG functional category : - COG ID : - EC number : - Position : 4839993 - 4843118 bp Length : 3126 bp Strand : - Note : known to control colony form variation and autoaggregation. may also function as an adhesin; highly similar (87.199% id) to EC042_2242 DNA sequence : ATGCTGATGAAACGACATCTGAATACCTGCTACAGGCTGGTATGGAATCACATTACGGGCGCTTTCGTGGTTGCCTCCGA ACTGGCCCGCGCACGGGGTAAACGTGGCGGTGTGGCGGTTGCACTGTCTCTTGCCGCAGTCACGTCACTCCCGGTGCTGG CTGCTGACATCGTTGTGCACCCGGGTGAAACAGTGAATGGCGGAACACTGGTAAACCATGACAACCAGTTTGTATCCGGA ACAGCTGATGGCGTGACTGTCAGTACCGGGCTTGAGCTGGGGCCGGACTCTGATGACAACACCGGCGGTCAGCAGATAGC CCGGGGTGGCACTGCCAGAAACACCACGGTCACCGCAAACGGTCTGCAGGATGTCATGGCAGGTGGCAGTGCCACGGATA CGGTTATCAGTGCCGGTGGAGGACAGAATCTGCGCGGGCAGGCTTACGGTACTGTCCTTAACGGTGGTGAACAATGGATA CATGCAGGCGGCAGTGCATCCGGAACGGTGATTAACCAGTCTGGCTACCAGACCATTAAACATGGCGGGCAGGCAACCGG AACCATCGTCAACACCGGTGCAGAAGGTGGTCCGGAGTCTGAAAATGTGTCCAGCGGTCAGATGGTCGGAGGGACGGCTG AATCCACCACCATCAACAAAAATGGCCGGCAGGTTATCTGGTCTTCGGGGATGGCACGGGACACCCTCATTTACGCCGGC GGTGACCAGACGGTACACGGCGAGGCACATAACACCCGGCTGGAGGGAGGAAACCAGTATGTGCACAAATACGGACTTGC GCTGAACACGGTAATTAACGAGGGGGGCTGGCAGGTGATTAAGGAAGGAGGAACTACCGCGCATACCACCATCAACCAGA AAGGAAAGCTGCAGGTGAATGCCGGCGGTAAAGCGTCTGATGTCACCCAGAACACGGGAGGTGCACTGGTTACCAGCACA GCTGCAACCGTCACCGGCACAAACCGCCTGGGAGCATTCTCCGTTCTGGCGGGTAAGGCTGATAATGTCGTACTGGAAAA TGGCGGACGTCTGGATGTGCTGAGCGGACACACAGCCACTAATACCCGTGTGGATGATGGCGGAACGCTGGATGTCCGCA ACGGTGGTGCCGCCACCACCGTATCCATGGGGAATGGCGGTGTACTGCTGGCCGATTCCGGGGCCGCTGTCAGTGGTACC CGGAGCGACGGAACGGCATTCCGTATCGGGGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCT GAACGCCGGTGATACGGCCACGGATACCACGGTAAATGGCGGACTGTTCACTGCCAGAGGGGGCTCGCTGGCGGGCACCA CCACGCTGAATAACGGTGCCACGCTTACCCTTTCCGGGAAAACGGTGAATAACGATACCCTGACCATCCGTGAAGGTGAT GCACTCCTGCAGGGAGGCGCTCTTACCGGTAACGGCAGGGTGGAAAAATCAGGAAGTGGCACACTCACTGTCAGCAACAC CACACTCACCCAGAAAACCGTCAACCTGAATGAAGGCACGCTGACGCTGAACGACAGTACCGTCACCACGGATGTCATCG CTCAGCGCGGCACGGCCCTGAAGCTGACCGGCAGCACAGTGCTGAACGGTGCCATTGACCCCACGAATGTCACCCTGACA TCCGGTGCCACCTGGAATATCCCTGATAACGCCACGGTGCAGTCGGTGGTGGATGACCTCAGCCATGCCGGACAGATTCA TTTCACCTCCACCCGCACAGGGAAGTTCGTACCGGCAACCCTGCAGGTGAAAAACCTGAACGGGCAGAATGGCACCATCA GCCTGCGTGTACGCCCGGATATGGCGCAGAACAATGCTGACAGACTGGTCATTGACGGTGGCAGGGCAACCGGAAAAACC ATCCTGAATCTGGTGAACGCCGGCAACAGTGGTACGGGGCTGGCGACCACCGGTAAGGGTATTCAGGTGGTTGAGGCCAT TAACGGTGCCACCACGGAGGAAGGGGCTTTTGTCCAGGGGAATATGCTGCAGGCCGGGGCCTTTAACTACACCCTCAACC GGGACAGTGATGAGAGCTGGTATCTGCGCAGTGAAGAACGTTATCGTGCTGAAGTCCCCCTGTACGCCTCCATGCTGACA CAGGCAATGGACTATGACCGGATTCTGGCAGGCTCACGCAGCCATCAGACCGGTGTAAACGGTGAAAATAACAGCGTCCG TCTCAGCATTCAGGGCGGCCATCTCGGTCACGATAACAACGGCGGTATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCA GCTATGGCTTCGTCCGTCTGGAGGGTGACCTGCTCAGAACAGAGGTCGCCGGTATGTCACTGACGACAGGAGTGTATGGT GCTGCAGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGCGCCGGCACGGTCCGGGATGATGCCGGCAGCCT GGGCGGATATATGAACCTGACACACACCTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGTATGA AAGCGTCATCGGGCAATAACGACTTCCGCGCACGGGGCTGGGGCTGGCTGGGCTCACTGGAAACCGGTCTGCCCTTCAGT ATTACTGACAACCTGATGCTGGAGCCACGGCTGCAGTACACCTGGCAGGGGCTTTCGCTGGATGACGGTAAGGACAACGC CGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCT TTGGTGAAGGCACCTCATCCCGTGCCCCCCTGCGTGACAGTGCAAAACACAGTGTGCGTGAACTGCCGGTGAACTGGTGG GTACAGCCTTCCGTTATCCGCACCTTCAGCTCCCGGGGTGATATGCGTGTGGGGACCTCCACCGCAGGCAGCGGGATGAC GTTCTCTCCCTCACAGAATGGCACTTCACTGGATCTGCAGGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGG GCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGTTATAACAGTCAGGCCACGCTGAATGTGACC TTCTGA Protein sequence : MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGVAVALSLAAVTSLPVLAADIVVHPGETVNGGTLVNHDNQFVSG TADGVTVSTGLELGPDSDDNTGGQQIARGGTARNTTVTANGLQDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWI HAGGSASGTVINQSGYQTIKHGGQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAG GDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVIKEGGTTAHTTINQKGKLQVNAGGKASDVTQNTGGALVTST AATVTGTNRLGAFSVLAGKADNVVLENGGRLDVLSGHTATNTRVDDGGTLDVRNGGAATTVSMGNGGVLLADSGAAVSGT RSDGTAFRIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGSLAGTTTLNNGATLTLSGKTVNNDTLTIREGD ALLQGGALTGNGRVEKSGSGTLTVSNTTLTQKTVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLT SGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKT ILNLVNAGNSGTGLATTGKGIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLT QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYG AAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGLWADIVAQGTRHSMKASSGNNDFRARGWGWLGSLETGLPFS ITDNLMLEPRLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWW VQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNSQATLNVT F |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66200.1 | hypothetical protein | Virulence | PAI III 536 | Protein | 0.0 | 93 |
| sap | AAK00474.1 | Sap | Not tested | SHI-1 | Protein | 0.0 | 92 |
| SF2991 | NP_708765.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 92 |
| aidA | ADD91708.1 | AidA | Not tested | PAI-I AL862 | Protein | 0.0 | 87 |
| flu | CAI43838.1 | antigen 43 | Not tested | LEE | Protein | 0.0 | 87 |
| Z1211 | NP_286746.1 | adhesin | Not tested | TAI | Protein | 0.0 | 58 |
| Z1651 | NP_287154.1 | adhesin | Not tested | TAI | Protein | 0.0 | 58 |
| unnamed | AAL08472.1 | putative autotransporter | Not tested | SRL | Protein | 0.0 | 57 |
| unnamed | CAE85197.1 | antigen43 protein orthologue | Not tested | PAI V 536 | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| flu2 | YP_006098789.1 | antigen 43 autotransporter (fluffing protein) [contains: antigen 4 alpha chain; antigen 43 beta chain] | VFG1675 | Protein | 0.0 | 93 |
| flu2 | YP_006098789.1 | antigen 43 autotransporter (fluffing protein) [contains: antigen 4 alpha chain; antigen 43 beta chain] | VFG0655 | Protein | 0.0 | 92 |
| flu2 | YP_006098789.1 | antigen 43 autotransporter (fluffing protein) [contains: antigen 4 alpha chain; antigen 43 beta chain] | VFG1063 | Protein | 0.0 | 57 |
