|
Name : EC042_4007 (EC042_4007) Accession : YP_006098292.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : type III secretion-associated chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 4252237 - 4252734 bp Length : 498 bp Strand : + Note : - DNA sequence : ATGGAAAGCGCAAATCTGGATTTAGAAGAAAATAAAGAAATTGCCAGTAAGTTCGAACGTGCACTAGGTATGGGAGCAAC ACTTGCAGAGCTGCATGGCATTACTCCGGATACACTTGAAGGCGTTTATGCTTACGCTTATAACTTTTATGAAAAAGGAA GACTTGACGAAGCTGAACTCTTTTTTAAATTTCTCTGTATTTATGATTTCCAAAATTATAACTATTTAAAAGGATATGCC GCCGTCTGTCAGTTGAAGAAAGATTATCAAAAGGCATTCGACATGTATCATATCTGTTTAATGCTATCTCCCGATAACGA TTTCTCTTTGGTTTATTACATGGGCCAGTGCCAGATGGGCTTAAAAAACACTAAAATGGCCACGGAGTTATTTAATACAG TCGTAACCTACAGCCAAAATGAAAAAATTAAAGAGATGGCTACTGCTTATCTTGAACTCTTGACAGCCAATACCGAAGAG GAAGTTCAAACAGAGTGA Protein sequence : MESANLDLEENKEIASKFERALGMGATLAELHGITPDTLEGVYAYAYNFYEKGRLDEAELFFKFLCIYDFQNYNYLKGYA AVCQLKKDYQKAFDMYHICLMLSPDNDFSLVYYMGQCQMGLKNTKMATELFNTVVTYSQNEKIKEMATAYLELLTANTEE EVQTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 9e-28 | 48 |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 9e-28 | 48 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 9e-28 | 48 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 9e-28 | 48 |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 6e-20 | 45 |
| ECs3708 | NP_311735.1 | hypothetical protein | Not tested | LIM | Protein | 1e-33 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC042_4007 | YP_006098292.1 | type III secretion-associated chaperone | VFG0547 | Protein | 3e-28 | 48 |
| EC042_4007 | YP_006098292.1 | type III secretion-associated chaperone | VFG0988 | Protein | 6e-29 | 42 |
| EC042_4007 | YP_006098292.1 | type III secretion-associated chaperone | VFG2451 | Protein | 9e-29 | 41 |
| EC042_4007 | YP_006098292.1 | type III secretion-associated chaperone | VFG1769 | Protein | 2e-22 | 41 |
