Gene Information

Name : EC042_3997 (EC042_3997)
Accession : YP_006098282.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : prophage regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4242871 - 4243137 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGCTGTTTTTTCTTCCCCGTCTCCCGCCCCTGTGACGCCACTGATGCCGCTGCCGGACATCACGCAGGAGCGTTT
TTTACGTCTGCCGGAAGTGATGCACCTGTGCGGCCTGTCACGCTCGACCATCTACGAACTCATCCGTAAGGGGGAATTTC
CGCCGCAGGTGAGTCTTGGCGGTAAAAATGTGGCCTGGCTGCACTCTGAAGTCACCGCATGGATGGCCGGGCGCATTGCC
GGACGCAAACGGGGGTACGACGCATGA

Protein sequence :
MQAVFSSPSPAPVTPLMPLPDITQERFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAWMAGRIA
GRKRGYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4828 NP_458906.1 phage DNA binding protein Not tested SPI-10 Protein 1e-22 70
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 50
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 50
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3997 YP_006098282.1 prophage regulatory protein VFG1118 Protein 9e-11 50