|
Name : aaspC (EC042_3692) Accession : YP_006097978.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : fimbrial outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 3913330 - 3915921 bp Length : 2592 bp Strand : - Note : - DNA sequence : ATGAACCTAAAGCTCAAAAAACTCGAACACGGAATGGCAAGGCACAAGCAGATGAAGCGGTGTATGCTGCTTCTACTGAC ACTTTTGCCTGCGTGTTCAGTGGCGGGTATGCGCTTTAACCCTGCATTCCTGTCGGGTGATACAGAAGCTGTTGCTGATT TATCTCGTTTTGAGAAAGGGATGACATATCTACCTGGTAGTTATGAGGTTGAAATATGGGTCAATGATTCGCCTTTGACA TCACGTAAGGTTACTTTCAAAGCTGATGAGCAGAATCAGTTGATCCCCTGTTTTTCGCTCGATGAGTTAGTTACTTTAGG AATTAACAAAAGTGCATTGCCGGAACAGGCGCAAGCAGAGGGAAATAATTGTCTCGATTTACGTATATGGTTCGCAGAAG TTCAATACACTCCTGAACTGGATGCGCAACGACTCAAACTGACCTTTCCGCAGGCAATATTAAAGCATGAAGCCCGTGGT TATATTCCACCTGAGGAATGGGATAATGGTATCCCGGCCATTCTTATTAATTATGATTTTTCTGGCAACAGTGATCGTGG AGACTATGCGTCTGATAGTTATTATTTAAATCTCCGTTCAGGTTTAAATTTAGGGGCGTGGCGTTTTCGTGATTATTCTA CATGGAGTCGTTCAGGTAATTCACCGGGTAAAATTGCACATGTGAGTAGTACGTTACAACGAGTAATTATTCCTTTTAAA AGTGAATTAACACTAGGTGATACCTGGTCTTCATCGGATGTTTTCGACAGTGTGAGTATTCGTGGTGCTAAACTTGAATC CGATGAAAACATGCTACCCGATAGCCAAAGTGGTTTTGCCCCCACTGTGCGCGGTATTGCTAAAAGCAATGCTCAGGTAA CGATCAAACAAAATGGCTATGTTATTTATCAGACATATACTCCACCGGGACCCTTTGAAATCAACGATCTGAACCCTACG TCTTCCGCTGGGGATTTGGAAGTTACGATCAAAGAGTCTGATAATTCCGAAACTATCTATACCATTCCTTACGCCGCTGT TCCCATTCTTCAACGCGAAGGGCATATTAAATATTCGGCAACTGCCGGTAAATATCGTAGCAATAGCTATAATCAAAACA GTCCGAATGTCTTTCAAGGAGATTTGATTTGGGGGTTACCCTGGGATATTACCGCCTACGGAGGGATGCAATACTCAAAT AATTATCGGGCAATAGCACTCGGGCTTGGGTTCAACCTTGGTATGTTTGGTGCGACGTCATTTGATTTAACGCAAGCCAA TAGCACGCTTGCCGATGGCAGTAAACATCAAGGGCAATCGTACCGTTTCCTATATTCAAAATCGTTAGTGCAGACAGGTA CGGCTTTTCAGATTATTGGTTATCGCTATTCGACGGAGGGATTTTATTCTTTGAGTGATACCACATACAAACAAATGTCG GGTACGGTTATCGATCCAGATACCCTTAATGAAAAAGACTATGTTTATAACTGGAATGATTTTTATAATTTACGTTATAA CAAAAGAGGAAAGTTTCAGGCAAATATATCGCAACCATTGGGCGAATATGGCTCTATGTATTTGGCGGCAAGTCAACAAA CTTACTGGAATACGAATAATAAAGATACCTTGTATCAAGTCGGCTATAATACGAGTGTACATGAGATTTATTTAAATATT GCTTATAATTATAGCAAGTCACCAGGTTCAGATGCGGACAGAATCTTATCCGTAAATGTCTCATTGCCGATCAGCAATTG GTTATCACCAGCTGTCGATGGGCGTACTGCGACAAATTCTATGACAGCAACTTATGGTTATAGTCAGGATAATAGCGGTC ATGTGAATCAGTATGCTGGAGTATCTGGATCGCTGCTGGAACAACATAATCTCAACTATAATATTCAACAAAATTTTGCT AACCAGAATAATGGCGAAAATGGCGCGGTAGGTTTAAATTACCGTGGTACATATGGTTCACTAAATTCTGGATACAGCTA CGATAATAATGGTAACCAGCAATTTAACTATGGTTTAAGTGGTGCCCTGGTTGTTCACGAAAATGGTCTCACGTTAAGCC AGCCGTTAGGAGAAACAAATATACTGATAAAAGCACCTGGGGCAAACAATGTAAATGTGGAGCGCGGAACGGGGGTTAAA ACAGACTGGCGTGGCTATGCTGTCGTACCTTATGCCACGGAATATCGGCGTAATAATATCTCTTTAGACCCTATGTCTAT GAGTATGCATACAGAATTAGATGCTACTACTATGGAAGTGATACCCAGCAAAGGTGCTTTAGTTCGTGCTGAGTTTAATG CACATGTCGGTATTCGAGGTTTATTTAATGTTCACTATCGTAATAAACCAGTTCCATTTGGTGCGACGGTCAGTGTACCC ACTGAGGGGACAACTCAGATTACAGGAATAGTGGGTGACAGTGGGCAGGTTTATCTCTCCGGTTTGCCTTTACAAGGCAT AATAAATATACAGTGGGGAGAAAGTGCTTATCAGCAATGTCGGGCAAGTTATCAATTACCGAAAAGCGAACTGGATAATG CCATTAGCTATGCAAATCTGGAGTGCCGCTAA Protein sequence : MNLKLKKLEHGMARHKQMKRCMLLLLTLLPACSVAGMRFNPAFLSGDTEAVADLSRFEKGMTYLPGSYEVEIWVNDSPLT SRKVTFKADEQNQLIPCFSLDELVTLGINKSALPEQAQAEGNNCLDLRIWFAEVQYTPELDAQRLKLTFPQAILKHEARG YIPPEEWDNGIPAILINYDFSGNSDRGDYASDSYYLNLRSGLNLGAWRFRDYSTWSRSGNSPGKIAHVSSTLQRVIIPFK SELTLGDTWSSSDVFDSVSIRGAKLESDENMLPDSQSGFAPTVRGIAKSNAQVTIKQNGYVIYQTYTPPGPFEINDLNPT SSAGDLEVTIKESDNSETIYTIPYAAVPILQREGHIKYSATAGKYRSNSYNQNSPNVFQGDLIWGLPWDITAYGGMQYSN NYRAIALGLGFNLGMFGATSFDLTQANSTLADGSKHQGQSYRFLYSKSLVQTGTAFQIIGYRYSTEGFYSLSDTTYKQMS GTVIDPDTLNEKDYVYNWNDFYNLRYNKRGKFQANISQPLGEYGSMYLAASQQTYWNTNNKDTLYQVGYNTSVHEIYLNI AYNYSKSPGSDADRILSVNVSLPISNWLSPAVDGRTATNSMTATYGYSQDNSGHVNQYAGVSGSLLEQHNLNYNIQQNFA NQNNGENGAVGLNYRGTYGSLNSGYSYDNNGNQQFNYGLSGALVVHENGLTLSQPLGETNILIKAPGANNVNVERGTGVK TDWRGYAVVPYATEYRRNNISLDPMSMSMHTELDATTMEVIPSKGALVRAEFNAHVGIRGLFNVHYRNKPVPFGATVSVP TEGTTQITGIVGDSGQVYLSGLPLQGIINIQWGESAYQQCRASYQLPKSELDNAISYANLECR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 48 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 3e-180 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| aaspC | YP_006097978.1 | fimbrial outer membrane usher protein | VFG0446 | Protein | 0.0 | 49 |
| aaspC | YP_006097978.1 | fimbrial outer membrane usher protein | VFG0876 | Protein | 0.0 | 48 |
| aaspC | YP_006097978.1 | fimbrial outer membrane usher protein | VFG1645 | Protein | 2e-180 | 45 |
| aaspC | YP_006097978.1 | fimbrial outer membrane usher protein | VFG0912 | Protein | 9e-180 | 45 |
| aaspC | YP_006097978.1 | fimbrial outer membrane usher protein | VFG0454 | Protein | 2e-168 | 43 |
