Gene Information

Name : kpsT (EC042_3239)
Accession : YP_006097532.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3457137 - 3457808 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAGATTGAGAATTTGACGAAGTCATATCGCACGCCAACGGGGCGACACTATGTGTTTAAGGATTTAAACCTCGA
AATTCCTTCAGGAAAAAGTGTTGCCTTTATTGGTCGTAATGGTGCGGGTAAATCAACGTTACTGAGAATGATTGGCGGCA
TTGACCGCCCCGACAGTGGAAAGATCATCACCAATAAAACGATATCATGGCCAGTCGGCCTTGCAGGTGGATTTCAGGGA
AGTTTAACCGGACGCGAAAACGTAAAATTTGTTGCGCGGTTATACGCGAAGCAAGAAGAGCTGAAAGAGAAAATTGAGTT
TGTCGAAGAATTTGCCGAACTCGGTAAGTACTTCGATATGCCGATTAAAACTTACTCATCTGGTATGCGATCGCGTTTAG
GCTTTGGTTTAAGCATGGCATTTAAGTTTGATTATTATATCGTCGATGAAGTAACCGCAGTCGGTGATGCCAGGTTTAAA
GAAAAATGCGCTCAATTGTTTAAAGAAAGGCATAAAGAATCTAGTTTTTTAATGGTTTCACATAGTTTGAATTCATTGAA
AGAGTTTTGTGATGTGGCGATTGTGTTTAAAGACGATAATGCGGTTGGTTTTTATGAGGATGTTCAGGAAGGGGTGGATG
AGTATAAAAAAGATCAAAATATCTTCGTCTAA

Protein sequence : 
MIKIENLTKSYRTPTGRHYVFKDLNLEIPSGKSVAFIGRNGAGKSTLLRMIGGIDRPDSGKIITNKTISWPVGLAGGFQG
SLTGRENVKFVARLYAKQEELKEKIEFVEEFAELGKYFDMPIKTYSSGMRSRLGFGLSMAFKFDYYIVDEVTAVGDARFK
EKCAQLFKERHKESSFLMVSHSLNSLKEFCDVAIVFKDDNAVGFYEDVQEGVDEYKKDQNIFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-73 74
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-70 73
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-41 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_006097532.1 polysialic acid transport ATP-binding protein VFG1449 Protein 7e-71 73
kpsT YP_006097532.1 polysialic acid transport ATP-binding protein VFG0696 Protein 3e-44 44
kpsT YP_006097532.1 polysialic acid transport ATP-binding protein VFG0258 Protein 8e-42 44