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Name : kpsC (EC042_3234) Accession : YP_006097527.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein Function : - COG functional category : - COG ID : - EC number : - Position : 3447541 - 3449568 bp Length : 2028 bp Strand : + Note : - DNA sequence : ATGATTGGCATTTACTCGCCTGGCATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCACAACCGTGCCAGAAACTTTC TCTGCTGCGTCCTGTTCCGCAAAACGTCGATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG CCGCCGCTTTCTCTGGTGGTGGATGATTGTGGCATTTACTACGATGCCAGCAAGCCTTCAGCACTGGAGAAACTGGTACA GGATAAAGCCGGAAATACAGCTCTGATAAGCCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATTTGTCGAAAT ATAACCTGGCACCTGCGTTTGTGGCTGATGAGTCAGAACGTTCAGACATCGTTCTGGTTGTCGATCAGACATTTAATGAT ATGTCAGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCCGCGATGGCGGAAAATCCTCAAGC CGAAATTTGGGTGAAGGTGCACCCAGATGTACTGGAAGGAAAGAAAACAGGTTATTTCGCCGATCTGCGCGCCACGCAAC GAGTACGTTTAATTGCCGAGAATGTCAGCCCGCAGTCGCTGTTGCGACACGTTTCCCGGGTTTACGTCGTGACCTCCCAG TACGGCTTTGAAGCCTTGCTGGCAGGAAAACCGGTGACATGCTTCGGCCAGCCCTGGTATGCAGGCTGGGGCTTAACCGA CGATCGCCATCCGCAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAGGAACTTTTTGCCGCTGCATACC TGCGTTACTGTCGCTATATCGATCCGCAAACGGGAGAAGTAAGCGATCTATTTACCGTGCTGCAATGGCTGCAATTACAA CGTCGACATCTGCAACAGCGTAATGGTTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCGGCAATCCTGAAACCTTT CTTGCGTACCGCAACAAACAGACTGAGTTATTCACGCCGTTGTACTGCGGCGACGGCTTGCGTGGTATGGGGTGTAAAGG GAGAACAGCAATGGCGAGCCGAAGCGCAACAAAAATCACTGCCGTTATGGCGAATGGAAGATGGTTTTCTGCGTTCATCC GGACTTGGCTCTGACCTGCTGCCGCCGCTATCGTTGGTACTGGATAAACGCGGGATCTACTATGACGCCACGCGCCCCAG CGACCTGGAAGTCCTGCTTAATCACAGCCAGTTAACGCTGGCGCAGCAGATGCGAGCTGAAAAATTACGCCAGCGACTGG TTGAAAGCAAACTGAGCAAATACAACCTAGGGGCCGATTTTTCTCTGCCTGCCGAGGCCAAAGATAAAAAAGTTATCCTG GTGCCGGGTCAGGTAGAAGACGATGCCTCGATTAAAACCGGCACAGTCTCGATTAAGAGCAACCTTGAGTTATTACGCAC AGTACGCGAGCGTAATCCGCACGCTTACATTATTTATAAACCGCACCCGGATGTACTGGTGGGGAATCGCAAGGGCGATA TTTCGGCAGAATTGACTGCTGAACTTGCTGACTATCAGGCACTGGACGCAGATATTATTCAATGCATTCAGCGCGCAGAT GAAGTGCACACCATGACATCATTGTCCGGGTTTGAAGCGTTATTACATGGCAAGCAAGTTCATTGTTACGGCCTGCCCTT CTATGCCGGTTGGGGTTTAACCGTCGATGAACATCACTGCCCGCGCCGCGAACAAAAATTAACGTTAGCAGATTTGATCT ATCAGGCGTTGATTGTTTATCCAACCTATATCCACCCAACACGGCTACAACCTATTACGGTTGAAGAGGCGGCGGAATAT TTGATCCAGACGCCGCGCAAGCCGATGTTTATTACCCGAAAAAAAGCGGGGCGAGTAATACGCTATTACCGCAAATTAAT TATGTTCTGCAAGGTCAGATTTGGCTAA Protein sequence : MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQNVDAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE PPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFND MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQ RRHLQQRNGYLWAPGLTLWKSAILKPFLRTATNRLSYSRRCTAATACVVWGVKGEQQWRAEAQQKSLPLWRMEDGFLRSS GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGDISAELTAELADYQALDADIIQCIQRAD EVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHCPRREQKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEY LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 98 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 98 |
| kpsC | CAE85214.1 | KpsC protein | Virulence | PAI V 536 | Protein | 8e-176 | 93 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 2e-127 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | YP_006097527.1 | capsule polysaccharide export protein | VFG0259 | Protein | 1e-127 | 50 |
| kpsC | YP_006097527.1 | capsule polysaccharide export protein | VFG0692 | Protein | 2e-118 | 47 |
| kpsC | YP_006097527.1 | capsule polysaccharide export protein | VFG0704 | Protein | 9e-106 | 47 |
