Gene Information

Name : EC042_3229 (EC042_3229)
Accession : YP_006097521.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3440725 - 3441567 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGAAATCACAGCCTCTCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACGAAAGAGTACATTGCTGCAAATCGACACACTTATCCGACAACTGGCTGAAATATCAGCAATAACAGAAA
GTATTAGAGGTAAAACGGCTCTGGACTGGGCCATGAAACAGGATTTTCGCTGCGGTTGCTGGCTGATGGAGAAACCGGAA
ACCGCAATGAAAGCCATCACACGCAATCTTGATCGCGAACTCTGGCGTGATCTGATGCAACGTTCCGGGATGCTGAGTCT
GATGGATGCGCAGACCCGGGACACATGGTACAGGTCACTGGAATATGATAATTTTCCGGAAATCAGCGAAGCGAACATTC
TGAGCACATTTGAACAACTGCACCAGAACAAAGATGAAGTGTTTGAACGGGGAGTGATCAACGTCTTCAAAGGGCTGAGC
TGGGATTACAAAACCAACTCACCCTGTAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACCGGTGGGG
GTTTCATCTTATCACCGGGCAACAGACTGACCGACTCGTCGACCTGGAAAGAATGCTACATCTGTTCAGCGGCAAACCGA
TCCCCGACAACCGGGAAAACATCACTATTCGTCTGGATGGTCACATCCAGTCCGTTCAGGGTAAAGAGCGCTATGAAGAC
GAGATGTTCATCATTAAATACTTTAAGAAGGGATCTGCACACATCACTTTCAAAAGGCTGGAACTGATTGACAGAATTAA
CGATATAATAGCCAGGTACTTTCCTTCTGTGCTCTCAGCCTGA

Protein sequence :
MSEITASRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISAITESIRGKTALDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDRELWRDLMQRSGMLSLMDAQTRDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFKGLS
WDYKTNSPCKFGSKIIVNNLVRWDRWGFHLITGQQTDRLVDLERMLHLFSGKPIPDNRENITIRLDGHIQSVQGKERYED
EMFIIKYFKKGSAHITFKRLELIDRINDIIARYFPSVLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 5e-130 99
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 4e-130 99
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 5e-130 99
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 4e-126 96
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 1e-125 96
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 3e-126 95
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 6e-120 90
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-119 89
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-119 89
unnamed AAL57572.1 unknown Not tested LEE Protein 5e-118 88
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 5e-117 88
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 4e-107 85
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-116 84
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-116 84
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-114 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3229 YP_006097521.1 hypothetical protein VFG0666 Protein 2e-130 99
EC042_3229 YP_006097521.1 hypothetical protein VFG1533 Protein 3e-120 90
EC042_3229 YP_006097521.1 hypothetical protein VFG1685 Protein 2e-107 85