Gene Information

Name : EC042_3227 (EC042_3227)
Accession : YP_006097519.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3439943 - 3440431 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTTAATCTCGCTGAACTGTTTAATAAAGTCGCGGAAAATGGTTATTCACTCCGCGTGGTGGAGGAATCCGACCAAC
AGTCAACCTGCACACTACCACCGTTTGCAACCCTTGCCGGCATACGCTGCAGTACCGCACATATCACGGAAAAGGATAAC
GCCTGGCTGTACTCGCTGTCACACCAGACCAGTGACTTCGGTGAATCAGAATGGATTCATTTCACAGGTAGCGGATATCT
GTTACGTACCGATGCGTGGTCATATCCGGTTCTGCGGCTTAAACGCCTGGGGCTGTCAAAAACGTTCCGTCGTCTGGTTG
TCACACTCATCCAACGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGTCTGCCGGACCTGCCCACTTTC
GACTGGTAA

Protein sequence :
MKLALTLEADSINVQALNMGRIVVDVDGVNLAELFNKVAENGYSLRVVEESDQQSTCTLPPFATLAGIRCSTAHITEKDN
AWLYSLSHQTSDFGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIQRYGVSLIHLDASAECLPDLPTF
DW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-69 96
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 1e-68 94
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 3e-66 93
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 8e-67 92
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 2e-67 92
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 3e-64 91
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 3e-64 90
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 3e-64 90
unnamed AAL08479.1 unknown Not tested SRL Protein 2e-63 89
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 1e-57 89
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 2e-63 88
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 2e-63 88
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 2e-63 88
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 3e-65 88
unnamed AAC31487.1 L0008 Not tested LEE Protein 2e-63 88
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 2e-60 86
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 2e-62 86
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-61 86
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-61 86
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 2e-62 86
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-53 85
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 3e-59 85
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 2e-55 85
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 1e-60 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3227 YP_006097519.1 hypothetical protein VFG1621 Protein 1e-64 91
EC042_3227 YP_006097519.1 hypothetical protein VFG1070 Protein 8e-64 89
EC042_3227 YP_006097519.1 hypothetical protein VFG0787 Protein 6e-64 88
EC042_3227 YP_006097519.1 hypothetical protein VFG0664 Protein 7e-63 86
EC042_3227 YP_006097519.1 hypothetical protein VFG1531 Protein 1e-59 85
EC042_3227 YP_006097519.1 hypothetical protein VFG1683 Protein 4e-61 84