Gene Information

Name : EC042_3221 (EC042_3221)
Accession : YP_006097513.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3436895 - 3437713 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGCAATTAGCCAGTCGTTTTGGTCATGTAAATCAGATCCGTCGGGAGCGCCCACTGACACGCGAAGAACTGATGTACCA
CGTCCCGAGTATTTTTGGAGAAGACCGGCACACCTCCCGCAGTGAACGGTATGCGTACATTCCCACCATCACCGTCCTGG
AAAATCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACCCGTGTGCGCGACCAGAGCCGCCGGGAATATACC
AAACATATGCTGCGTCTGCGGCGGGCCGGACAGATAACCGGTCAGCATGTGCCTGAAATTATTCTGCTCAACTCTCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATTCAGGAGAATATGCTGAAAGGCGGAATTTCAGGTCGCAGCGCTAAAGGAAAA
CGTATCCATACCCGTGCCATTCACAGCATTGACACTGACATTAAGCTCAATCGTGCATTGTGGGTGATGGCAGAAACACT
GCTGAAGAGTATGCGCTGA

Protein sequence :
MQLASRFGHVNQIRRERPLTREELMYHVPSIFGEDRHTSRSERYAYIPTITVLENLQREGFQPFFACQTRVRDQSRREYT
KHMLRLRRAGQITGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRALWVMAETLLKSMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-116 97
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-115 96
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 6e-115 95
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 7e-112 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 5e-113 94
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 7e-112 94
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 4e-113 93
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-114 93
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-114 93
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 4e-113 93
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 5e-113 93
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 4e-113 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-114 92
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-113 91
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-113 91
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-74 56
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 5e-73 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3221 YP_006097513.1 hypothetical protein VFG1526 Protein 1e-116 97
EC042_3221 YP_006097513.1 hypothetical protein VFG1615 Protein 3e-115 96
EC042_3221 YP_006097513.1 hypothetical protein VFG1676 Protein 3e-113 94
EC042_3221 YP_006097513.1 hypothetical protein VFG0658 Protein 6e-114 91