Gene Information

Name : EC042_3218 (EC042_3218)
Accession : YP_006097510.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : putative DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3435061 - 3435741 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGATGATCGTTCCCGGCATGATCGTCTGGCGGTTCGCTTATCACTCATTATCAGCCGACTGATGGCCGGAGAATC
TCTGTCACTAAAGACACTGTCAGATGAATTTGGCGTTACAGAACGTACTTTACAGCGCGATTTTCATCAGCGTCTGGTTC
ACCTGGATTTAGAGTACAGAAATGGCAGGTACAGCCTCAGACGACAGAGCAGCCCGTGTGCGATCCCTGAAATGCTTTCT
TTTATACAGAATACCGGGATCGCACGGATACTTCCGCTCCGGAACGGACGACTGATAACCTTTCTTACCGACAACCAGGA
GCCCTCTCCCTGCCTTATCTGGCTGCCGGCGCCGGATATCACTGCAACGTTCCCCGAGTGTTTCTCGCAACTCATCCTGG
CAATAAGACAGTGTATCCACATCTCTCTGATGACTGAGCGATGGTATCCGTCACTGGAGCCCTGCCGGCTCATTTATTAC
AGCGGTAGCTGGTATCTGATCGCGTTACAGAAGGGAAAACTGCAGGTCTTTCCTCTGGCAGATATCAAATCAGTCAGCCT
GACATCAGAACGGTTTGAACGGAGAGGCCACATCCACAGTCTGGTCGCTGAAGAGCGTTTTATCTCCGCCCTGCCACATT
TCTCTTTCATCCATAAACTTATCAACACCTTTAACCTGTGA

Protein sequence : 
MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYRNGRYSLRRQSSPCAIPEMLS
FIQNTGIARILPLRNGRLITFLTDNQEPSPCLIWLPAPDITATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYY
SGSWYLIALQKGKLQVFPLADIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 6e-101 99
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 1e-101 99
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 8e-101 98
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 4e-101 98
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 3e-101 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3218 YP_006097510.1 putative DNA-binding protein VFG1523 Protein 3e-101 99
EC042_3218 YP_006097510.1 putative DNA-binding protein VFG1613 Protein 8e-102 99