Gene Information

Name : EC042_3182 (EC042_3182)
Accession : YP_006097475.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : ParB-like nuclease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3399284 - 3399922 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence :
ATGGGGGATTCTGTGACACCGGAGATACTGAGCAACATGATTCGTCAGTACTTCAGCCAGGAACGACCAGAAGAAGAGGC
CATACAGGCCCTGAATCATCTGCGCAGGGTGCTTCATGAGGTCAGTCCATTTGCACAGGAGCCTGTGGACTGTGTGCTGT
GGGTGAAAGCAGATGAGGTGGTGGCCAACGATTATAACCCCAATGTCATGGCGCCGGGTGAGAAGAAACTGCTGAAACAT
TCACTGGAGCAGGATGGGTTCACGCAGCCTGTGGTTGTCTCGGAAGAGAAGGAGCATTATCTGGTCGTGGATGGTTTTCA
TCGTCAATTACTGGGCAGGGAAGCAGGTACGGGAAAACGCCTGAAGGGCTGGTTGCCAGTGACCTGTATTAATCCGGAAA
GAAAGGGACAGGCCTCACGTATTGCTGCAACCATTAGACATAACCGGGCCAGGGGGAAGCACCAGATAACTTCAATGTCT
GATATTGTCAGGGACCTGTCGCGGCTGGGCTGGACGGATGAACGTATTGGTACGGAGCTGGGTATGGACCAGGATGAAGT
TCTCAGGTTGAAACAGATTAGCGGGCTGACGGAGCTGTTTCTGGAAGAGGATTTCAGTCCGGCATGGACGGTTCGCTGA

Protein sequence :
MGDSVTPEILSNMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLLKH
SLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGREAGTGKRLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITSMS
DIVRDLSRLGWTDERIGTELGMDQDEVLRLKQISGLTELFLEEDFSPAWTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-95 96
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-95 96
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 4e-95 95
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 4e-95 95
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-92 93
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-77 92
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-77 92
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-77 92
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 9e-79 81
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 7e-81 81
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 7e-29 47
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 3e-29 47
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-29 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3182 YP_006097475.1 ParB-like nuclease VFG1505 Protein 7e-93 93