Gene Information

Name : EC042_3175 (EC042_3175)
Accession : YP_006097467.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : putative sulfatase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3388982 - 3390481 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGAATATCAGAAAGCTGTTTTATACGGACAATATATCCCGGATTTTATTGTTTTTATTCTTCCCGGGCATGTGTGTAAT
AACCACTGCCGCATGCGGATACACTGAGAAGAATGCCACCGGGAATGTGTTGCTGCTGTTTCTCCTTCTGATTCTTGCAC
ACAGAAATACCCTTACATCCATTACAGCTCTGTTATTTCTGTTCTGTTGTGCACTGTATGCACCTGTCGGTATGACGTAC
GGAAAAATCAACAACAGTTTTATTGTCGCGTTGTTGCAGACCACGGCGGATGAGGCTGCGGAGTTTACCGGGATGATTCC
TGTTTATCATTTTCTGGTCAGTGCCGCGATTCTGGTGTTCATGGTTATTTTCTGGCGGACACACCACCGTGGTCAACGTA
ACGCGATGGCTCTGTTGTTATTCGTATTATGCTCTGTAAACAGCTGGCCGTTACGGATGGTTAAAGGAACAGTTGTGGGG
ACAACTGACACATTGCGTGAAATGCAGCGTTATGAACAACTGAGTCGGCACGGTGCTGACAGCTGGAAAATCCTGCCGGG
AGCACCATTATATGACACGATTGTTATTGTTACTGGTGAGAGTGTCCGCAGGGATTATATGTCGGTATATGGTTATCCCG
AGCCAACCACACCATGGCTGAATACGGCTCCCGGTTTATTTATTGACGGTTATACATCGGCAGCAGCCAGCACCGTGCCT
TCCCTGAGCCGGACACTGATTTATGACTATGAGCAGAACCCTGATTCCGGCAACAACGTGGTGGCGCTGGCAGCAAAAGC
AGGATACAGCACATGGTGGATATCCAATCAGGGAAAACTGGGAGAGCATGACACACGCATCTCTGTTATTGCTTCTGATG
CGGACCATACTGTTTTCCTCAAGAAAGGCAGCTTTGCTTCCCGTAAAACGGATGACATGTTGTTGTTACAGGAAACAGAA
CGTGCGCTGGCAGATACATCCACTCCGAAGGTGATTTTCCTGCACATGATGGGGTCTCATCCGAACCCGTGTGATCGGCT
TCACTCCTGGCAGAATAATTACCTGGAGCAGTATTCCCGAAAAATTGCCTGTTATCTTGCCAGCATCAGTAAACTGGATA
ACTTTCTTGGTCAGCTTGATGGTATCCTTCGCCGACACTCACGTCATTTCGCCATGCTTTACTTTTCTGACCATGGGCTG
TCGGTCAGCGACAGTGCTAATCCTGTTCATCATGATGGTCATGTGCAGGGAGGCTACAGCGTGCCCCTGATTATTACCGC
CAGTGATATAACCTCTCATCAGTCCCTCAGCAGAAAAATCAGTGCCCGTCATTTCACAGGTATTTTTCAGTGGCTGACCG
GTATTCGTACCGAAAATATACCGCCATTCAATCCACTGACAGACGAAGATAATGAACGCATTATGGTTTTTAACGGAGAG
AGGTATGTACAGGAAGACAGTCTGAAACCGCAGCCGCTTATTCTTCCGGACCACAGGTAA

Protein sequence :
MNIRKLFYTDNISRILLFLFFPGMCVITTAACGYTEKNATGNVLLLFLLLILAHRNTLTSITALLFLFCCALYAPVGMTY
GKINNSFIVALLQTTADEAAEFTGMIPVYHFLVSAAILVFMVIFWRTHHRGQRNAMALLLFVLCSVNSWPLRMVKGTVVG
TTDTLREMQRYEQLSRHGADSWKILPGAPLYDTIVIVTGESVRRDYMSVYGYPEPTTPWLNTAPGLFIDGYTSAAASTVP
SLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDADHTVFLKKGSFASRKTDDMLLLQETE
RALADTSTPKVIFLHMMGSHPNPCDRLHSWQNNYLEQYSRKIACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGL
SVSDSANPVHHDGHVQGGYSVPLIITASDITSHQSLSRKISARHFTGIFQWLTGIRTENIPPFNPLTDEDNERIMVFNGE
RYVQEDSLKPQPLILPDHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFX83957.1 sulfatase family protein Not tested SE-PAI Protein 0.0 96
yjgX CAD42019.1 hypothetical protein Not tested PAI II 536 Protein 1e-179 94
ORF_3 AAZ04414.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 93
APECO1_3531 YP_854244.1 hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3175 YP_006097467.1 putative sulfatase VFG1538 Protein 6e-180 94