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Name : EC042_3072 (EC042_3072) Accession : YP_006097367.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : - COG ID : - EC number : - Position : 3272069 - 3273772 bp Length : 1704 bp Strand : - Note : - DNA sequence : ATGAAAATAAAATTACGTATTACTATTATATTAATTTCAGCCTTATGCATTTTTAATGGATTATTGACTCCTGGTGCATA TGCCGCAACAGCGAATGGATACGTAGCAAATAAAGAAAATCTACGTAGTTTTTTTGAAACGGTTTCATCATATGCGGGTA AGCCTACAATAGTAAGTAAGCTTGCCATGAAGAAACAGATCAGCGGAAATTTTGATTTAACCGAACCCTATGCCTTGATT GAACGCCTGTCGGCGCAGATGGGACTTATTTGGTACGATGATGGCAAAGCTATTTATATCTATGACTCATCAGAGATGCG TAATGCGCTGATTAATCTGAGAAAGGTATCGACGAATGAGTTTAATAATTTTTTAAAAAAATCGGGTCTGTATAACTCTC GTTATGAAATTAAAGGGGGCGGCAATGGTACTTTCTATGTTTCGGGGCCACCGGTTTATGTTGACCTGGTCGTTAATGCT GCGAAATTAATGGAGCAAAACAGCGATGGCATCGAGATTGGACGAAATAAAGTAGGAATAATTCATCTGGTCAACACATT CGTTAATGATCGGACTTATGAATTACGTGGCGAAAAGATAGTTATTCCTGGCATGGCAAAAGTACTATCGACGTTGTTAA ATAATAACATTAAGCAAAGCACTGGGGTTAACGTACTTTCTGAAATTTCAAGTCGTCAACAACTAAAAAACGTATCACGT ATGCCTCCTTTTCCTGGTGCTGAAGAAGATGATGATCTACAAGTAGAGAAAATAATATCGACAGCTGGAGCGCCAGAGAC TGACGATATACAAATTATTGCATATCCTGATACCAACAGTTTACTTGTTAAAGGAACAGTATCTCAGGTTGATTTTATCG AGAAGTTAGTAGCTACACTCGATATTCCAAAGCGACACATTGAATTATCTTTATGGATAATAGATATTGATAAGACTGAT TTAGAACAGTTAGGAGCTGACTGGTCGGGCACGATAAAAATTGGATCCAGCCTAAGTGCATCATTTAATAATTCAGGTTC AATTAGTACCCTGGATGGGACACAGTTTATTGCAACAATACAGGCACTTGCGCAAAAAAGAAGAGCCGCCGTTGTTGCTC GTCCTGTCGTTTTAACACAGGAGAATATTCCTGCTATATTTGATAATAACCGTACTTTCTATACTAAATTAGTCGGCGAG CGTACTGCGGAGTTGGATGAAGTAACCTATGGTACGATGATTAGCGTGCTACCACGATTTGCGTCGCGAAATCAAATTGA ATTACTCTTGAATATTGAAGATGGCAATGAAATCAATTCTGACAAGACCAATGTTGATGATCTGCCTCAGGTTGGTAGAA CGCTTATAAGTACTATTGCGCGCGTGCCTCAAGGGAAAAGTCTTTTGATTGGTGGATATACACGAGATACGAATACCTAT GAAAGTCGCAAGATCCCAATATTAGGCAGTATTCCATTTATTGGTAAATTATTTGGATATGAAGGAACAAATGCGAATAA CATCGTTCGTGTCTTTCTTATTGAGCCAAGAGAGATCGATGAGCGCATGATGAATAATGCGAATGAGGCTGCGGTTGACG CCAGAGCAATAACACAGCAAATGGCAAAAAATAAAGAAATCAACGATGAATTACTGCAGAAATGGATAAAAACTTACCTG AATCGTGAAGTCGTCGGAGGATAG Protein sequence : MKIKLRITIILISALCIFNGLLTPGAYAATANGYVANKENLRSFFETVSSYAGKPTIVSKLAMKKQISGNFDLTEPYALI ERLSAQMGLIWYDDGKAIYIYDSSEMRNALINLRKVSTNEFNNFLKKSGLYNSRYEIKGGGNGTFYVSGPPVYVDLVVNA AKLMEQNSDGIEIGRNKVGIIHLVNTFVNDRTYELRGEKIVIPGMAKVLSTLLNNNIKQSTGVNVLSEISSRQQLKNVSR MPPFPGAEEDDDLQVEKIISTAGAPETDDIQIIAYPDTNSLLVKGTVSQVDFIEKLVATLDIPKRHIELSLWIIDIDKTD LEQLGADWSGTIKIGSSLSASFNNSGSISTLDGTQFIATIQALAQKRRAAVVARPVVLTQENIPAIFDNNRTFYTKLVGE RTAELDEVTYGTMISVLPRFASRNQIELLLNIEDGNEINSDKTNVDDLPQVGRTLISTIARVPQGKSLLIGGYTRDTNTY ESRKIPILGSIPFIGKLFGYEGTNANNIVRVFLIEPREIDERMMNNANEAAVDARAITQQMAKNKEINDELLQKWIKTYL NREVVGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3733 | NP_311760.1 | EivG | Not tested | LIM | Protein | 0.0 | 99 |
| invG | NP_457292.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 3e-139 | 52 |
| invG | NP_806501.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 3e-139 | 52 |
| invG | YP_217817.1 | invasion protein; outer membrane | Virulence | SPI-1 | Protein | 8e-139 | 52 |
| invG | NP_461819.1 | outer membrane secretin precursor | Virulence | SPI-1 | Protein | 8e-139 | 52 |
| invG | AAS66859.1 | InvG | Not tested | SSR-2 | Protein | 4e-119 | 47 |
| ysaC | AAS66838.1 | YsaC | Not tested | SSR-1 | Protein | 3e-87 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC042_3072 | YP_006097367.1 | type III secretion system protein | VFG0559 | Protein | 3e-139 | 52 |
| EC042_3072 | YP_006097367.1 | type III secretion system protein | VFG1004 | Protein | 2e-107 | 49 |
