Gene Information

Name : EC042_3071 (EC042_3071)
Accession : YP_006097366.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3270919 - 3272064 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGATTCATGTAGAGCATGTCGGTGTATTAGAAAGAGCCAGAGAAGTTTCTCGCTTAGAGGACATTATCACAGAAGA
TAATGAAGATATTGAAGCTGAAATGCCTAAAATGGGGGATGATCCCGCCGGTAAAGAAGCTCGATTCTTACAAGCTACTG
ACGAGATGTCAGCAGCGTTAACGCAGTTTATGAAGAAAAAAATCTACGAAGAACAACTGGCCAACTTTCTGGACGGAGAA
GAATATGTCCTGGAAGATCAGCCAATAGAAAAAACCGATAAAGTCATGGAGGCGCTTAAGGCAGCAACTACCCATGACTA
TGAAGTGTATAGCTTTGCTAAAAAATTATTTCCAGATGAAAGCGATCTGGTGGTTGTATTACGTGCAATTTTACGTAAAA
AACAAATATCTGAAAATGTGCGGCTAAACGCTGAAGCATTACTTAAAAAAGTTAATCAAGAGACTACTAAAAAATTCATT
AATAGCGGTATTAACTCGGCATTAAAAGCAAAGTTATTTGGCCAGGCGTTGTCATTAAATCCAAAATTACTAAGGGCAAG
TTATCGACAATTTTTAATGGCAGAAGACGATGCTGTAGATACTTATGTCGAATGGATTGGTAGTTATGGCTATCAAAATA
GAATGCTGGTGACAAAATTTATCAAAGAGACGCTTTTCTCAGATATAAATGCACTTGATGCGAGCTGTTCATCATTGGAA
TTTGGTATGTTTCTCAATAAGTTGTCACAACTATTGTCTCTTCAGTCGGCAGAGGCTTTATTTCTGAAAACTTTAATGAA
TAACCCAATAATTAATAAATTTATTAGCGCAGAAGATTATTGGATATTTTTTCTGATATCGTTAATAAAATTTCCTGAGA
CTGCAGAGGAACTCCTGAAAAATGCACTGGTAACCCTACCCGCAGATGCTAATTATAAAGACAAAACGTTACTCCTGAAG
GCGATTTACAGCGGATGTACAAATCTTCCATTTTCACTTTTTATTAATAATGAACAATTATTAGAGATTAGGGAGTGTTG
TAAACAGGCAATAAAAGTAACATTTGCAGCAGAACTCTTTGATACACAAAACAGTAATAAAAAACAAAATAAAAAACCAT
GGAAGAAGGTAATGTTCAATGTTTAA

Protein sequence : 
MAIHVEHVGVLERAREVSRLEDIITEDNEDIEAEMPKMGDDPAGKEARFLQATDEMSAALTQFMKKKIYEEQLANFLDGE
EYVLEDQPIEKTDKVMEALKAATTHDYEVYSFAKKLFPDESDLVVVLRAILRKKQISENVRLNAEALLKKVNQETTKKFI
NSGINSALKAKLFGQALSLNPKLLRASYRQFLMAEDDAVDTYVEWIGSYGYQNRMLVTKFIKETLFSDINALDASCSSLE
FGMFLNKLSQLLSLQSAEALFLKTLMNNPIINKFISAEDYWIFFLISLIKFPETAEELLKNALVTLPADANYKDKTLLLK
AIYSGCTNLPFSLFINNEQLLEIRECCKQAIKVTFAAELFDTQNSNKKQNKKPWKKVMFNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3732 NP_311759.1 EivE Not tested LIM Protein 6e-146 99
invE NP_457291.1 cell invasion protein Virulence SPI-1 Protein 6e-40 43
invE NP_806500.1 cell invasion protein Virulence SPI-1 Protein 6e-40 43
invE YP_217816.1 invasion protein Virulence SPI-1 Protein 5e-40 43
invE NP_461818.1 invasion protein Virulence SPI-1 Protein 5e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_3071 YP_006097366.1 type III secretion system protein VFG0558 Protein 2e-40 43