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Name : EC042_3070 (EC042_3070) Accession : YP_006097365.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : - COG ID : - EC number : - Position : 3268866 - 3270926 bp Length : 2061 bp Strand : - Note : - DNA sequence : ATGTTTAACAAAGTTTTGATAGGGTTAAGGAGTCATCCAGAATTAATAATTCTTGGATTAATGGTGATGATTATCGCCAT GCTCATAATTCCATTGCCCACCTACTTAATCGATTTTTTGATTGGGCTGAACTTAACATTGGCAATACTTGTGTTTTTAG GATCATTCTATGTTGATAGGATCTTAAGTTTTTCTTCATTCCCATCAATTCTTCTCATCACAACGTTATTTCGTTTGGCG CTGGCGATCAGTACCAGCCGACTTATACTTCTTGAGGCGGACGCCGGAGAAATTATAACGAGTTTTAGTGAATTCGTTAT TGGAGATAGCCTGGTAGTTGGTTTTGTTATTTTCTCCATTGTTACTATTGTTCAGTTTATCGTGATTACTAAAGGTTCGG AACGTGTGGCTGAAGTTGCTGCCCGCTTTTCGCTTGACGGTATGCCAGGTAAACAAATGAGTATTGACGCCGATCTACGC GCCGGGATCATTGATGCAGATTTAGCAAAAGAACGTCGTAGCGTATTAGAACGAGAGAGTCAGCTGTATGGTTCCTTTGA TGGTGCGATGAAATTTATCAAAGGTGATGCTATTGCAAACATTATTATTATCTTTGTTAATATTATCGGTGGGCTATCAG TAGGAGTAGGCCAAAATGGAATGGATTTCTCGACAGCGTTGACCGTCTACACAATTCTTACCGTCGGTGATGGTCTTGTT TCTCAAATTCCAGCTTTATTAATTGCTATTAGTGCAGGGTTTATCGTAACGCGCGTGAATGGCGATAGTGATAATATGGG GCAAAATATAATGTCCCAGTTATTAAGTAATTCTTTTGTCATTATTGTGACATGTGTCCTCGCGCTAAGTATTGGGTTGC TTCCAGGTTTTCCCCTTCTTGTGTTTTTATGTTTGGCAGTAATCTTAGGAATTTATTTTTACTTTAAATTCAAAAAGAAA GGGGTTGAAGAAACGGTTGTTGAGGGAGATATCACCGTTGGGTTGGAACCCTATAATCAGGATGATGATATTTCATTAGG TATTATTAATAAACTTGATCAGGTTATTACCGAAACGGTACCCTTGGTTTTGATTATGAATAGTGTACAGGCTAAAAAAT ACACTGAAATCAATCTTGCTGATAGGATTCGTAGTCAGTTTTTTATTGAGTATGGTATCCGTATTCCCGGTATTGTCATT CGCGAGGGGGAAGGCCTTAATGATGAAGATGTCATATTAATGCTAAATGAAGTCAGAGCCTCGCAATTTAAAATTTATCA TGATCTTGTCTTGTTAGTTGAATATTCAGATGAAGTGGTTTCGACTTTGATCAAGAAACCTGTCATCGTAAATAGTAATG GTGAACAATATTATTGGGTTACAAAAAGTGATGCCCAAAAATTAACAAAAATTGGCTGTTATACTCGCACGGCCATGGAT GAAATGTACAATCATTTATCTGTATGTCTGGCTCATAATATTAATGAGTATTTTGGTATACAAGAAACCAAATATATTCT TGATCAATTAGAGATGAAGTATCCTGATCTATTAAAAGAAATATTAAGATATATAACCGTGCAGCGCATTTCAGAGGTAA TTCAGCGTCTGATCCAGGAGCGAATTTCAGTGCGCAATATGCGTTTAGTTATGGAGGCTTTAGCATTATGGAGCCCACGA GAGAAAGATATAATTACACTCGTCGAGCATGTACGAGGTGCATTAGGTCGCTACATTTGCCATAAGTTTTCATATTCTGG AGAAATTAAAGCAATTGTTATTTCGCCTGAAATAGAGGACAGAATCAGAGATGGTGTCAGGCCTACCGCTGGCGGTACTT TTCTTAATCTCGATGCATCCGAAGCTGAGATGATTCTGGATAATTTTAAACTGGCACTTTCTGGAATCAATATTCCTATT AAAGACATTATTTTACTGGGATCTGTTGATATTCGTCGTTTTATCAAAAAACTTATTGAATCTAGTTATCGAGACCTCGA AGTACTTTCGTACGGGGAACTAACGGAAAATGTTCCCGTTAATATTCTGAAAACTATTTAG Protein sequence : MFNKVLIGLRSHPELIILGLMVMIIAMLIIPLPTYLIDFLIGLNLTLAILVFLGSFYVDRILSFSSFPSILLITTLFRLA LAISTSRLILLEADAGEIITSFSEFVIGDSLVVGFVIFSIVTIVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLR AGIIDADLAKERRSVLERESQLYGSFDGAMKFIKGDAIANIIIIFVNIIGGLSVGVGQNGMDFSTALTVYTILTVGDGLV SQIPALLIAISAGFIVTRVNGDSDNMGQNIMSQLLSNSFVIIVTCVLALSIGLLPGFPLLVFLCLAVILGIYFYFKFKKK GVEETVVEGDITVGLEPYNQDDDISLGIINKLDQVITETVPLVLIMNSVQAKKYTEINLADRIRSQFFIEYGIRIPGIVI REGEGLNDEDVILMLNEVRASQFKIYHDLVLLVEYSDEVVSTLIKKPVIVNSNGEQYYWVTKSDAQKLTKIGCYTRTAMD EMYNHLSVCLAHNINEYFGIQETKYILDQLEMKYPDLLKEILRYITVQRISEVIQRLIQERISVRNMRLVMEALALWSPR EKDIITLVEHVRGALGRYICHKFSYSGEIKAIVISPEIEDRIRDGVRPTAGGTFLNLDASEAEMILDNFKLALSGINIPI KDIILLGSVDIRRFIKKLIESSYRDLEVLSYGELTENVPVNILKTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 0.0 | 99 |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 0.0 | 64 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 0.0 | 64 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 0.0 | 64 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 0.0 | 64 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 1e-155 | 56 |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 6e-152 | 55 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 7e-89 | 41 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 4e-89 | 41 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 5e-89 | 41 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 4e-89 | 41 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 5e-89 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC042_3070 | YP_006097365.1 | type III secretion system protein | VFG0557 | Protein | 0.0 | 64 |
| EC042_3070 | YP_006097365.1 | type III secretion system protein | VFG1006 | Protein | 1e-173 | 61 |
| EC042_3070 | YP_006097365.1 | type III secretion system protein | VFG1780 | Protein | 2e-142 | 51 |
| EC042_3070 | YP_006097365.1 | type III secretion system protein | VFG0064 | Protein | 9e-103 | 42 |
| EC042_3070 | YP_006097365.1 | type III secretion system protein | VFG0813 | Protein | 2e-89 | 41 |
| EC042_3070 | YP_006097365.1 | type III secretion system protein | VFG0729 | Protein | 4e-89 | 41 |
