Gene Information

Name : epaR (EC042_3062)
Accession : YP_006097357.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3263601 - 3264368 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGGGGGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCGGTTTTTGCCGATTGGCACCAACTTT
CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTTCGTCACCCAATAATAATAGTGGTATCATGTGCAT
TAGTTCAGCATTACCACTATGAATTATCTACCCTAAATGAAATAGATATCGCTTTGTTTGCTGCCAGAGAAATTATCATA
GGGTTGTTTATTGCTTGCTTATTAGCATCCCCATTTTGGATTTTCCTTGCTATAGGCAGCTTTATCGATAACCAACGTGG
TGCAACGTTAAGTAGTACTTTGGATCCGGCTACAGGTGTCGATACATCGGAATTAGCAAGATTATTTAACCTTTTCTCTG
CAGCAGTTTATCTTACTAACGGTGGATTGAACTTTATTCTGGAGACTCTATGGCAAAGTTATAACTTATGGCCTTCAGGA
AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAATATAATGACTCATACTATCGTTTACGCAAGCCC
CGTGATTGCGGTTATGCTGGGCGGTGAAGCTGTCCTGGGATTGCTGGCACGCTATGCTTCACAACTAAATGCTTTTGCCA
TCTCACTAACTGTCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGGCCCAATACTGGCTGAACGAGTTATG
CCGTTATCCTTTTTCCCAGAACAATTGCAATTATACATTGATAAATAG

Protein sequence :
MGEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALVQHYHYELSTLNEIDIALFAAREIII
GLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTNGGLNFILETLWQSYNLWPSG
NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFGPILAERVM
PLSFFPEQLQLYIDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epaR AAZ31291.1 EpaR Virulence ETT2 Protein 1e-82 99
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 8e-41 47
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 3e-41 47
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 8e-41 47
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-39 46
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 9e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaR YP_006097357.1 type III secretion system protein VFG0549 Protein 1e-41 47
epaR YP_006097357.1 type III secretion system protein VFG1014 Protein 3e-36 43