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Name : gabD (EC042_2858) Accession : YP_006097158.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3051506 - 3052954 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT CATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCTGATGAAACCCGCGCCGCTA TCGACGCCGCCAACCGCGCTCTGCCCGCCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCGCTGGCTGAAGCGAAAGG TGAAATCAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCTGAAGAAGGCAAACGCATTTATGGCGACACCATTCCTGGTC ATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCGGCTATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGCAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACGATGGTGCTGAAACCTGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCGGAACTGGCGATTCGCGCAGGCGTTCCGGCTGGCGTATTTAACGTGGTCACCGGTTCGGCGG GCGCGGTCGGTAACGAACTGACCAGCAATCCGCTGGTGCGCAAGCTGTCGTTTACCGGCTCGACCGAAATTGGCCGCCAG TTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTTATCGTCTTTGACGA TGCCGACCTCGACAAAGCCGTGGAAGGCGCACTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC GTTTATATGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTACAGCAGGCGGTGAGCAAACTGCACATCGGCGAC GGGCTGGAGAAAGGCGTCACCATCGGGCCGCTGATTGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC GCTGGAGAAAGGTGCGCGTGTGGTTTGCGGCGGTAAAGCACACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGG TGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACATTCGGCCCCCTCGCCCCGCTGTTCCGTTTTAAAGATGAA GCCGATGTGATCGCGCAAGCCAATGACACCGAATTTGGTCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAGGCGCTGGAGTACGGCATCGTCGGCATTAATACTGGCATTATTTCCAATGAAGTGGCCCCGTTCGGTG GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-158 | 67 |
