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Name : EC042_2578 (EC042_2578) Accession : YP_006096881.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : fimbrial outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 2724788 - 2727427 bp Length : 2640 bp Strand : - Note : - DNA sequence : ATGCCAGAACATTCTTTTCTCCGTTTACGGGGGCTTTCGTGGTGGATTGCTCTGGCAATTTCTGGAAGTCCATTTAATGC CCTGGCAGACGATATCATTCAGTTTGATGGCCGATTTCTTGATTTAAAAGGCAATACCAAAATTGATTTGGGCCGTTTTT CGCAAAAAGGCTATGTAGAACCGGGAAAATATAACTTACGCGTTCATGTAAATAATCAGCCGTTACCTGACGACTACGAT ATCTACTGGTACGCAACTGAAAACGATCCGAATAAATCATATGCCTGCTTATCGCCAGAGCTGGTTGCCCAGTTTGGTCT GAAGGAAGATATTGCAAAGAATTTGCAATGGATCCGCGATGGTCAGTGTCTGAATACGGCACTTTTAGCAGGTACAGAAA TTAGCGGCGATTTAGGCCAGTCTGCACTCCTTGTTTCTGTACCGCAGGCTTATCTGGAATATACCGACAGCGAGTGGGAT CCGCCTTCGCGCTGGGATGACGGTATCCCTGGGCTTATTGCCGATTACAGTATCAACGCGCAAACCCGACATGAAAATGG GGGTGATGACACTAACGACATCAGCGGTAATGGTACGGTCGGCGTTAACGTTGGGCCGTGGCGCTTACGAGCTGACTGGC AGAGCGATTATCAGCATACCCGCAGTAACGATGACGGCGACACCGACGATAGCGGTACGCAAAAAAACTGGGAGTGGAGT CGTTACTACGCCTGGCGCGCCTTGCCGTCATTAAAAGCCAAACTTTCGCTGGGCGAAGATTATCTCAACTCCGATATTTT TGATGGCTTCAGTTACATTGGCGGCAGCATCAGTACCGATGATCAAATGTTACCGCCAAACCTGCGCGGCTACGCACCCG ATATTTCAGGTGTTGCACACACTACCGCTAAAGTGACCGTAACCCAAATGGGCCGTGTCATTTACGAAACCCAGGTGCCC GCAGGGCCATTCCGCATTCAGGATATTGGCGACTCCGTCTCTGGCACGCTGCATGTCCGCATTGAAGAACAAAACGGCCA GGTACAAGAATACGACGTCAGCACAGCGTCCATGCCGTTCCTGACTCGCCCCGGCCAGGTGCGTTATAAAGTGACAATGG GGCGTCCACAAAACTGGGACCATCAGGTTGCAGGTAGCTTCTTCTCGGGCGGTGAGGCATCCTGGGGGATTGCCAATGGC TGGTCGCTCTACGGCGGTGCGTTAGCCGATGAAAACTACCAGTCGGCGGCGCTGGGCCTCGGTCGTGACCTGGCGCTGTT AGGCGCGTTAGCGTTTGATGTCACTCACTCTCGTGTTCAACTCGACGATAACAGCGTGTATGGCAACAAAACGCTGGACG GCAACTCTTATCGCGTCAGCTATGCCAAAGATTTCGATGAACTCAACAGTCGGGTGACGTTTGCTGGATACCGCTTCTCT GAAAAAAACTACATGACCATGAGCGAGTATCTGGATGCGAACGACGACGACCGGGCGCGCACCGGTAACGACAAAGAGAT GTATACGGTCACCTATAACCAGAACTTCACGGATGCGCGCGTTTCGGTCTATCTCAACTATTCCCACCATACCTACTGGG ATCGCCAGGATCAGACCAACTACAACATGATGCTTTCTCATTATTTCAATTTAGGAAGTCTTCGCAACCTGAGCGTTTCT CTGACCGGTTATCGCTACGAATACGATAAAAGTGCCGACAAGGGGGTTTATCTGTCCTTAAGTTTGCCGTGGGGCGACAA CAGCACCATCAGTTACAACGGCAACTATGGCAGCGGTGCCGACAGCAATCAGGTGAGCCTGTACCACCGCATTGATGACG CCAGCCACTACACGGTAAGCGCCGGAACCAGCGAAAACCACAGCAGCGTGGATGGCTACTACAGCCACGATGGTACTCTG GCAAAAGTTGATCTCAGTGCCAACTACCATGAAGGGCAATACACCTCAGCGGGGATCTCTTTACAGGGCGGGGCAACGCT GACCGCTCACGGCGGGGCGCTGCATCGTACACAAAACATGGGCGGTACACGTCTGTTAATCGACGCTGATGGCGTTGCTA ATGTGGCGGTTGAAGGTAATGGTTCCGCTGTTTATACCAACATGTTCGGCAAAGCGGTGGTGGCAGATGTTAATGATTAC TACCGCAACCAGGCTTATATCGATTTGAACAAACTGCCGGAAAACGCTGAAGCCACGAAATCAGTGGTTCAGGCAACGCT GACGGAAGGCGCTATTGGCTACCGTAAATTTGCGGTGATCAGTGGTGAGAAGGCGATGGCAGTGCTGCGCTTGCAGGATG GCAGCCATCCGCCATTTGGGGCGGAAGTGAAAAACGATAATCAACAACAAGTTGGATTGGTTGATGACGAAGGTAATGTT TATCTGGCAGGCGTTAAACCGGGTGAACATATGACCGTTTTCTGGGAGGGTGAATCTCACTGCGATATCAGCCTGCCAGA CCCGTTACCGAATGACCTGTTCAATGGCTTGTTGTTGCCATGCCAGCAAAAGGGGGGAAGTTCTCCCGTCATACCGCATG ATATTCAACCCGTCATTCAGGAGCAGACACAACAGGTGACACCAATGGAACCGCCGATGTCTGTTTCATCGAACCAATAA Protein sequence : MPEHSFLRLRGLSWWIALAISGSPFNALADDIIQFDGRFLDLKGNTKIDLGRFSQKGYVEPGKYNLRVHVNNQPLPDDYD IYWYATENDPNKSYACLSPELVAQFGLKEDIAKNLQWIRDGQCLNTALLAGTEISGDLGQSALLVSVPQAYLEYTDSEWD PPSRWDDGIPGLIADYSINAQTRHENGGDDTNDISGNGTVGVNVGPWRLRADWQSDYQHTRSNDDGDTDDSGTQKNWEWS RYYAWRALPSLKAKLSLGEDYLNSDIFDGFSYIGGSISTDDQMLPPNLRGYAPDISGVAHTTAKVTVTQMGRVIYETQVP AGPFRIQDIGDSVSGTLHVRIEEQNGQVQEYDVSTASMPFLTRPGQVRYKVTMGRPQNWDHQVAGSFFSGGEASWGIANG WSLYGGALADENYQSAALGLGRDLALLGALAFDVTHSRVQLDDNSVYGNKTLDGNSYRVSYAKDFDELNSRVTFAGYRFS EKNYMTMSEYLDANDDDRARTGNDKEMYTVTYNQNFTDARVSVYLNYSHHTYWDRQDQTNYNMMLSHYFNLGSLRNLSVS LTGYRYEYDKSADKGVYLSLSLPWGDNSTISYNGNYGSGADSNQVSLYHRIDDASHYTVSAGTSENHSSVDGYYSHDGTL AKVDLSANYHEGQYTSAGISLQGGATLTAHGGALHRTQNMGGTRLLIDADGVANVAVEGNGSAVYTNMFGKAVVADVNDY YRNQAYIDLNKLPENAEATKSVVQATLTEGAIGYRKFAVISGEKAMAVLRLQDGSHPPFGAEVKNDNQQQVGLVDDEGNV YLAGVKPGEHMTVFWEGESHCDISLPDPLPNDLFNGLLLPCQQKGGSSPVIPHDIQPVIQEQTQQVTPMEPPMSVSSNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 6e-150 | 44 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-148 | 44 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 3e-148 | 44 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 7e-150 | 44 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 7e-150 | 44 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 8e-150 | 44 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 2e-153 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC042_2578 | YP_006096881.1 | fimbrial outer membrane usher protein | VFG1548 | Protein | 4e-150 | 44 |
| EC042_2578 | YP_006096881.1 | fimbrial outer membrane usher protein | VFG0884 | Protein | 3e-150 | 44 |
| EC042_2578 | YP_006096881.1 | fimbrial outer membrane usher protein | VFG0895 | Protein | 4e-150 | 44 |
