Name : EC042_0232 (EC042_0232) Accession : YP_006094565.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : putative reverse transcriptase-Group II intron Function : - COG functional category : - COG ID : - EC number : - Position : 271826 - 273076 bp Length : 1251 bp Strand : + Note : - DNA sequence : ATGACAAAGACAAAAGCGTTTAACATTGATAAGTCACTGGTGGTCAGCGCGTACAGGCGAGTGAAGACCAGTGCAGGCGC GGCGGGAATTGATAAGCAATCGCTGGCGGACTTTGATAAACGGTTAGTTGATAATCTGTACAAAATCTGGAACCGACTTT CTTCAGGAAGTTATTTCCCACCGGCAGTGAAAGCGGTGGCAATTCCGAAGAAATTGGGTGGAGAGAGAATTCTGGGTATC CCGACAGTCAGCGATCGTATCGCGCAGACGGTGGTAAAACTGGCCTTTGAGCCACAGGTTGAGCCACATTTTCTGGCAGA CTCTTACGGCTACAGACCGAATAAATCGGCACTGGATGCTATAGGGGTAACGCGTAAGCGTTGCTGGTATTACGACTGGG TACTGGAATTTGACATCAAAGGGCTGTTCGATAACATCCCGCACGAACTGATAATGAAAGCCGTGGACAAACACAATCCG GCCCGGTGGGTAAAATTGTATATACAGCGGTGGCTGACAGCGCCGATGGTGATGTCAGACGGAGAAGTCAGAGCACGAAC AATGGGAACGCCGCAGGGAGGTGTCATAAGTCCGTTGCTGGCAAACCTGTTCATGCATTATGTGTTTGATAAATGGCTGG CAAAATATTATCCGAAAGTGCCGTGGTATCGATATGCTGATGATGGCATTTTGCATTGTCACAGCGAAGCAGAAGCGACT GAAATGCGAGAAGTATTACGCAAAAGATTTAGCGAATGCGGACTGGAAATGCATCCGGAGAAAACGCGAGTTATCTACTG CAAAGATGGAAGCCGGAAGGGTGATTATGAACATACCATGTTCGACTTTCTGGGGTACACATTCAGGCGACGCGTAGTAA AGAACGTTAAGCGAAACAGTCTGTTTGTAAGTTTTACCCCCGCAGCGAGCAAATCAGCGCTAAAGGCAATGCGTCGGGAA ATCAAAGCGACAGGGATAAGGAAAAGAGTGGATTTAAGCATTGAGCAGATAGCGAAATGGATAAATCCAAAACTGAATGG CTGGATAAATTATTACGGGCGATATACCTGTTCGGAATTATACAGCGTGTTCAGATATATCAATAAAGCACTGGTGAGGT GGGGGCGTAAGAAATATAAAATGCTCAGCCGATACAAGACAAGAGCCTCAAAATTTCTGGAAGAAATGGCGAAGCGAAGT CCACAGTTGTTTGCCCACTGGCGTCTGAAGATGAGAGGCGGACTTGTTTGA Protein sequence : MTKTKAFNIDKSLVVSAYRRVKTSAGAAGIDKQSLADFDKRLVDNLYKIWNRLSSGSYFPPAVKAVAIPKKLGGERILGI PTVSDRIAQTVVKLAFEPQVEPHFLADSYGYRPNKSALDAIGVTRKRCWYYDWVLEFDIKGLFDNIPHELIMKAVDKHNP ARWVKLYIQRWLTAPMVMSDGEVRARTMGTPQGGVISPLLANLFMHYVFDKWLAKYYPKVPWYRYADDGILHCHSEAEAT EMREVLRKRFSECGLEMHPEKTRVIYCKDGSRKGDYEHTMFDFLGYTFRRRVVKNVKRNSLFVSFTPAASKSALKAMRRE IKATGIRKRVDLSIEQIAKWINPKLNGWINYYGRYTCSELYSVFRYINKALVRWGRKKYKMLSRYKTRASKFLEEMAKRS PQLFAHWRLKMRGGLV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 3e-104 | 50 |
unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 9e-77 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
EC042_0232 | YP_006094565.1 | putative reverse transcriptase-Group II intron | VFG1512 | Protein | 5e-77 | 44 |