Gene Information

Name : EC042_2241 (EC042_2241)
Accession : YP_006096551.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : putative GTP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2334180 - 2335091 bp
Length : 912 bp
Strand : +
Note : -

DNA sequence :
GTGCGCGGGGTTTTGTCTTTTTTCACCGGGAATACATGTATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCT
CTCCTCCCTGCCTTACTCGCTTTCCCGTCACATCCTGGAACATCTGCGCAAACTCACCCGTCACGAACCCGTGATTGGCA
TTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTAATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTT
CACGCCGGCACCCGGGAAGTACGGCGCTTCCGTCTGAGTGGCCACGGTCACAGCATGGTTATCACTGACCTGCCCGGGGT
GGGCGAGAGCCGGGACAGGGATGCAGAGTATGAGGCCCTGTACCGTGACATTCTGCCTGAACTTGACCTGGTACTGTGGC
TGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGTATTTCTGGCGACACATCCTGCACCGGGGACATCAGCGGGTA
CTGTTTGTGGTGACGCAGGCCGACAAAACGGAGCCCTGCCATGAATGGGATATGGCCGGTATTCAGCCTTCTCCTGCACA
GGCACAGAATATTCGCGAAAAAACGGAGGCGGTATTCCGTCTGTTCCGGCCCGTACATCCGGTTGTGGCCGTATCGGCCC
GCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACC
CGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGCGCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATT
TGACACAGCGGAGAGCGTCTGTGTTGCCTCTGTTGTCCGTACGGCCCTGCGCGCTGTTCGTGACACGGTGGTCTCTGTTG
CCCGTGCGGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MRGVLSFFTGNTCMNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTRHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDV
HAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQRV
LFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMT
RLQDELRTESVRAQAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 5e-131 98
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 3e-131 98
unnamed AAL08471.1 unknown Not tested SRL Protein 1e-132 98
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 7e-131 98
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 7e-140 98
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-131 98
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 7e-140 98
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-132 98
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-137 97
Z1210 NP_286745.1 histone Not tested TAI Protein 3e-130 97
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 3e-130 97
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-138 97
unnamed AAL99256.1 unknown Not tested LEE Protein 1e-130 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_2241 YP_006096551.1 putative GTP-binding protein VFG1674 Protein 2e-131 98
EC042_2241 YP_006096551.1 putative GTP-binding protein VFG0654 Protein 3e-131 98
EC042_2241 YP_006096551.1 putative GTP-binding protein VFG1062 Protein 6e-133 98